oneChannelGUI : A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops

Package: oneChannelGUI
Version: 1.38.0
Date: 2 April 2015
Title: A graphical interface designed to facilitate analysis of
microarrays and miRNA/RNA-seq data on laptops
Author: Raffale A Calogero, Bioinformatics and Genomics Unit, Molecular
Biotechnology Center, Torino (Italy)
Maintainer: Raffaele A Calogero <raffaele.calogero@unito.it>
Depends: Biobase, affylmGUI, tkrplot, tkWidgets, IRanges, Rsamtools (>=
1.13.1), Biostrings, siggenes, chimera
Suggests: annotate, genefilter, maSigPro, pamr, pdmclass, ChIPpeakAnno,
chipseq, BSgenome, Rgraphviz, affy , annaffy, affyPLM, multtest,
ssize, sizepower, RankProd, org.Hs.eg.db, org.Mm.eg.db,
org.Rn.eg.db, edgeR, metaArray, MergeMaid, biomaRt,
GenomeGraphs, AffyCompatible, rtracklayer, Genominator, EDASeq,
limma, DESeq, DEXSeq, goseq, hugene10sttranscriptcluster.db,
mogene10sttranscriptcluster.db, ragene10sttranscriptcluster.db,
GOstats, AnnotationDbi, preprocessCore, baySeq,
HuExExonProbesetLocation, MoExExonProbesetLocation,
RaExExonProbesetLocation, snow, RmiR, RmiR.Hs.miRNA,
BSgenome.Hsapiens.UCSC.hg19, R.utils, cummeRbund,
BSgenome.Mmusculus.UCSC.mm9, BSgenome.Rnorvegicus.UCSC.rn4,
DESeq2, GenomicAlignments, BiocParallel, KEGG.db, miRNApath,
miRNAtap, miRNAtap.db
Description: This package was developed to simplify the use of
Bioconductor tools for beginners having limited or no
experience in writing R code. This library provides a graphical
interface for microarray gene and exon level analysis as well
as miRNA/mRNA-seq data analysis
License: Artistic-2.0
URL: http://www.bioinformatica.unito.it/oneChannelGUI/
biocViews: Sequencing, RNASeq, Microarray, OneChannel, DataImport,
QualityControl, Preprocessing, StatisticalMethod,
DifferentialExpression, GUI, MultipleComparison
NeedsCompilation: no
Packaged: 2016-05-04 03:00:12 UTC; biocbuild