R Graphical Manual

Last data update: 2014.03.03

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Results 1 - 10 of 26 found.
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latentnet : Latent Position and Cluster Models for Statistical Networks

Package: latentnet
Version: 2.7.1
Date: 2015-06-19
Title: Latent Position and Cluster Models for Statistical Networks
Authors@R: c(
person("Pavel N.", "Krivitsky", role=c("aut","cre"), email="pavel@uow.edu.au"),
person("Mark S.", "Handcock", role=c("aut"), email="handcock@stat.ucla.edu"),
person("Susan M.", "Shortreed", role=c("ctb")),
person("Jeremy", "Tantrum", role=c("ctb")),
person("Peter D.", "Hoff", role=c("ctb")),
person("Li","Wang",role=c("ctb"),email="lxwang@gmail.com"),
person("Kirk","Li",role=c("ctb"),email="kirkli@uw.edu")
)
Description: Fit and simulate latent position and cluster models for statistical networks.
Depends: R (>= 2.8.0), statnet.common, network, ergm (>= 3.2.0)
Imports: sna, mvtnorm, abind, coda (>= 0.17.1), tools
Suggests: KernSmooth, snowFT, rgl, heplots, rlecuyer, ergm.userterms
License: GPL-3 + file LICENSE
URL: http://www.statnet.org
NeedsCompilation: yes
Packaged: 2015-06-19 15:31:50 UTC; pavel
Author: Pavel N. Krivitsky [aut, cre],
Mark S. Handcock [aut],
Susan M. Shortreed [ctb],
Jeremy Tantrum [ctb],
Peter D. Hoff [ctb],
Li Wang [ctb],
Kirk Li [ctb]
Maintainer: Pavel N. Krivitsky <pavel@uow.edu.au>
Repository: CRAN
Date/Publication: 2015-06-20 00:36:25

● Data Source: CranContrib
● Cran Task View: Cluster, HighPerformanceComputing, SocialSciences
● 0 images, 18 functions, 3 datasets
● Reverse Depends: 1

mpa : CoWords Method

Package: mpa
Type: Package
Title: CoWords Method
Version: 0.7.3
Date: 2011-05-11
Author: Daniel Hernando Rodriguez <dhrodriguezt@unal.edu.co> & Campo
Elias Pardo <cepardot@unal.edu.co>
Maintainer: Campo Elias Pardo <cepardot@unal.edu.co>
Depends: R (>= 2.5.1), network
Description: CoWords Method
License: GPL (>= 2)
Encoding: latin1
Packaged: 2012-10-29 08:59:13 UTC; ripley
Repository: CRAN
Date/Publication: 2012-10-29 08:59:13

● Data Source: CranContrib
● 0 images, 6 functions, 0 datasets
● Reverse Depends: 0

ndtv : Network Dynamic Temporal Visualizations

Package: ndtv
Type: Package
Title: Network Dynamic Temporal Visualizations
Version: 0.10.0
Date: 2016-5-6
Authors@R: c(
person("Skye", "Bender-deMoll", role=c("cre","aut"), email="skyebend@uw.edu"),
person("Martina", "Morris", role=c("ctb"), email="morrism@u.washington.edu"))
Depends: R (>= 3.0), network (>= 1.13), networkDynamic (>=
0.8), animation (>= 2.4), sna
Imports: MASS, statnet.common, jsonlite, base64
Suggests: tergm (>= 3.1), tsna, testthat, knitr, htmlwidgets,
scatterplot3d
Description: Renders dynamic network data from 'networkDynamic' objects as movies, interactive animations, or other representations of changing relational structures and attributes.
License: GPL-3 + file LICENSE
URL: https://github.com/statnet/ndtv
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-05-06 19:40:27 UTC; rpackagebuilder
Author: Skye Bender-deMoll [cre, aut],
Martina Morris [ctb]
Maintainer: Skye Bender-deMoll <skyebend@uw.edu>
Repository: CRAN
Date/Publication: 2016-05-07 02:10:16

● Data Source: CranContrib
● 0 images, 18 functions, 3 datasets
● Reverse Depends: 0

networkDynamicData : Dynamic (Longitudinal) Network Datasets

Package: networkDynamicData
Type: Package
Title: Dynamic (Longitudinal) Network Datasets
Version: 0.2.1
Date: 2016-01-11
Authors@R: c(
person("Skye", "Bender-deMoll", role=c("cre"), email="skyebend@uw.edu"),
person("Martina", "Morris", role=c("ctb"), email="morrism@u.washington.edu"),
person("Li", "Wang", role=c("ctb"), email="lxwang@gmail.com"),
person("Gerhard","van de Bunt",role=c("ctb"), email="g.g.vande.bunt@vu.nl"),
person("Goele", "Bossaert", role=c("ctb"), email="goele.bossaert@ppw.kuleuven.be"),
person("Nadine", "Meidert", role=c("ctb"),email="nadine@meidert.net"),
person("SocioPatterns.org", role=c("ctb"), email='info@sociopatterns.org'),
person("Tore","Opsahi",role=c("ctb"), email='tore@opsahl.co.uk'),
person("Radoslaw","Michalski, (et al)",role=c('ctb'),email="radoslaw.michalski@pwr.edu.pl"),
person("Allison","Davis, (et. al.)",role=c("ctb")),
person("C.E.", "Priebe, (et. al.)",role=c("ctb"))
)
Depends: R (>= 3.0), networkDynamic (>= 0.6), network (>= 1.9)
Description: A collection of dynamic network data sets from various sources and multiple authors represented as 'networkDynamic'-formatted objects.
License: GPL-3 + file LICENSE
URL: http://statnet.org
NeedsCompilation: no
Packaged: 2016-01-11 20:38:54 UTC; rpackagebuilder
Author: Skye Bender-deMoll [cre],
Martina Morris [ctb],
Li Wang [ctb],
Gerhard van de Bunt [ctb],
Goele Bossaert [ctb],
Nadine Meidert [ctb],
SocioPatterns.org [ctb],
Tore Opsahi [ctb],
Radoslaw Michalski, (et al) [ctb],
Allison Davis, (et. al.) [ctb],
C.E. Priebe, (et. al.) [ctb]
Maintainer: Skye Bender-deMoll <skyebend@uw.edu>
Repository: CRAN
Date/Publication: 2016-01-12 00:23:27

● Data Source: CranContrib
● 0 images, 0 functions, 9 datasets
● Reverse Depends: 0

networkDynamic : Dynamic Extensions for Network Objects

Package: networkDynamic
Version: 0.9.0
Date: 2016-01-12
Title: Dynamic Extensions for Network Objects
Type: Package
Depends: R (>= 3.0.0), network (>= 1.13)
Imports: statnet.common, methods
Suggests: testthat
LinkingTo: network
Authors@R: c(
person("Carter T.", "Butts", role=c("aut"), email="buttsc@uci.edu"),
person("Ayn", "Leslie-Cook", role=c("aut"), email="aynlc3@uw.edu"),
person("Pavel N.", "Krivitsky", role=c("aut"), email="pavel@uow.edu.au"),
person("Skye", "Bender-deMoll", role=c("aut","cre"), email="skyebend@uw.edu"),
person("Zack", "Almquist", role=c("ctb"), email="almquist@uci.edu"),
person("David R.", "Hunter", role=c("ctb"), email="dhunter@stat.psu.edu"),
person("Li","Wang",role=c("ctb"),email="lxwang@gmail.com"),
person("Kirk","Li",role=c("ctb"),email="kirkli@uw.edu"),
person("Steven M.","Goodreau",role=c("ctb"),email="goodreau@uw.edu"),
person("Jeffrey", "Horner", role=c("ctb"), email="jeffrey.horner@gmail.com"),
person("Martina", "Morris", role=c("ctb"), email="morrism@u.washington.edu"))
Description: Simple interface routines to facilitate the handling of network objects with complex intertemporal data. This is a part of the "statnet" suite of packages for network analysis.
License: GPL-3
LazyLoad: yes
URL: http://statnet.org
NeedsCompilation: yes
Packaged: 2016-01-14 12:14:39 UTC; rpackagebuilder
Author: Carter T. Butts [aut],
Ayn Leslie-Cook [aut],
Pavel N. Krivitsky [aut],
Skye Bender-deMoll [aut, cre],
Zack Almquist [ctb],
David R. Hunter [ctb],
Li Wang [ctb],
Kirk Li [ctb],
Steven M. Goodreau [ctb],
Jeffrey Horner [ctb],
Martina Morris [ctb]
Maintainer: Skye Bender-deMoll <skyebend@uw.edu>
Repository: CRAN
Date/Publication: 2016-01-15 00:06:36

● Data Source: CranContrib
● 0 images, 30 functions, 4 datasets
● Reverse Depends: 5

networksis : Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling

Package: networksis
Version: 2.1-3
Date: 2015-04-07
Title: Simulate Bipartite Graphs with Fixed Marginals Through
Sequential Importance Sampling
Author: Ryan Admiraal <R.Admiraal@murdoch.edu.au> and Mark S. Handcock
<handcock@ucla.edu>
Maintainer: Ryan Admiraal <R.Admiraal@murdoch.edu.au>
Depends: network
Description: Tools to simulate bipartite networks/graphs with the
degrees of the nodes fixed and specified. 'networksis' is part
of the 'statnet' suite of packages for network analysis.
License: GPL (>= 2)
URL: http://statnet.org
NeedsCompilation: yes
Packaged: 2015-04-16 03:58:48 UTC; ryan
Repository: CRAN
Date/Publication: 2015-04-16 08:44:42

● Data Source: CranContrib
● 0 images, 2 functions, 1 datasets
● Reverse Depends: 0

lvm4net : Latent Variable Models for Networks

Package: lvm4net
Title: Latent Variable Models for Networks
Description: Latent variable models for network data using fast inferential
procedures.
Version: 0.2
Authors@R: person(given = "Isabella", family = "Gollini", role = c("aut","cre"), email = "igollini.stats@gmail.com")
Depends: R (>= 3.1.1), MASS, ergm, network, ellipse
Imports: igraph
License: GPL (>= 2)
LazyData: true
URL: http://github.com/igollini/lvm4net
BugReports: http://github.com/igollini/lvm4net/issues
Packaged: 2015-04-10 20:48:57 UTC; isagol
Author: Isabella Gollini [aut, cre]
Maintainer: Isabella Gollini <igollini.stats@gmail.com>
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-04-11 01:00:42

● Data Source: CranContrib
● 0 images, 12 functions, 3 datasets
● Reverse Depends: 0

OutbreakTools : Basic Tools for the Analysis of Disease Outbreaks

Package: OutbreakTools
Version: 0.1-14
Date: 2015-12-25
Title: Basic Tools for the Analysis of Disease Outbreaks
Author: The Hackout team (In alphabetic order: David Aanensen, Marc Baguelin, Paul Birrell, Simon Cauchemez, Anton Camacho, Caroline Colijn, Anne Cori, Xavier Didelot, Ken Eames, Christophe Fraser, Simon Frost, Niel Hens, Joseph Hugues, Thibaut Jombart, Lulla Opatowski, Oliver Ratmann, Samuel Soubeyrand, Marc Suchard, Jacco Wallinga, Rolf Ypma)
Maintainer: Thibaut Jombart <thibautjombart@gmail.com>
Suggests: EpiEstim
Depends: R (>= 3.0.0), methods, ggplot2, network, knitr
Imports: utils, RColorBrewer, ape, reshape2, sna, plyr, ggmap, scales,
rjson, networkDynamic, RCurl
Description: Implements basic tools for storing, handling and visualizing disease outbreak data, as well as simple analysis tools. OutbreakTools defines the new formal class obkData which can be used to store any case-base outbreak data, and provides summaries for these objects, alongside a range of functions for subsetting and data manipulation. It implements a range of graphics for visualising timelines, maps, contact networks and genetic analyses. It also includes a simple case-base outbreak simulation tool.
License: GPL (>= 2)
LazyLoad: yes
VignetteBuilder: knitr
URL: http://sites.google.com/site/therepiproject/r-pac/about
Encoding: UTF-8
Collate: 'auxClasses.R' 'generics.R' 'obkContacts.R' 'obkSequences.R'
'obkData.R' 'obkData_Accessors.R' 'subset.R' 'obkData_basics.R'
'uniqSequences.R' 'dna2uniqSequences.R' 'make.phylo.R'
'make.attributes.R' 'get.incidence.R' 'phylo2ggphy.R'
'plotggMST.R' 'plotggphy.R' 'plot.R' 'plotIndividualTimeline.R'
'simuEpi.R' 'utils.R' 'plotGeo.R' 'annotatedTreeReader.R'
'importFromJSON.R' 'zzz.R' 'OutbreakTools.R'
NeedsCompilation: no
Packaged: 2015-12-25 12:02:42 UTC; thibaut
Repository: CRAN
Date/Publication: 2015-12-26 00:40:07

● Data Source: CranContrib
● Cran Task View: Phylogenetics
● 49 images, 29 functions, 1 datasets
● Reverse Depends: 0

ergm.count : Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges

Package: ergm.count
Version: 3.2.2
Date: 2016-03-29
Title: Fit, Simulate and Diagnose Exponential-Family Models for
Networks with Count Edges
Authors@R: c(
person("Pavel N.", "Krivitsky", role=c("aut","cre"), email="pavel@uow.edu.au"),
person("Mark S.", "Handcock", role=c("ctb"), email="handcock@stat.ucla.edu"),
person("David R.", "Hunter", role=c("ctb"), email="dhunter@stat.psu.edu"))
LinkingTo: ergm
Depends: statnet.common (>= 3.1), ergm (>= 3.4), network
Description: A set of extensions for the 'ergm' package to fit weighted networks whose edge weights are counts.
License: GPL-3 + file LICENSE
URL: http://statnet.org
NeedsCompilation: yes
Packaged: 2016-03-29 11:55:31 UTC; pavel
Author: Pavel N. Krivitsky [aut, cre],
Mark S. Handcock [ctb],
David R. Hunter [ctb]
Maintainer: Pavel N. Krivitsky <pavel@uow.edu.au>
Repository: CRAN
Date/Publication: 2016-03-29 14:51:47

● Data Source: CranContrib
● 0 images, 3 functions, 1 datasets
● Reverse Depends: 1

ergm.ego : Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data

Package: ergm.ego
Version: 0.3.0
Date: 2016-03-26
Title: Fit, Simulate and Diagnose Exponential-Family Random Graph
Models to Egocentrically Sampled Network Data
Authors@R: c(
person("Pavel N.", "Krivitsky", role=c("aut","cre"), email="pavel@uow.edu.au"),
person("Steven M.", "Goodreau", role=c("ctb"), email="goodreau@u.washington.edu"),
person("Martina", "Morris", role=c("ctb"), email="morrism@u.washington.edu"),
person("Kirk", "Li", role=c("ctb"), email="kirkli@uw.edu"),
person("Emily N.", "Beylerian", role=c("ctb"), email="ebey@uw.edu"))
Depends: ergm (>= 3.5), network
Imports: statnet.common, coda, RColorBrewer
Description: Utilities for managing egocentrically sampled network data and a wrapper around the 'ergm' package to facilitate ERGM inference and simulation from such data.
License: GPL-3 + file LICENSE
URL: http://www.statnet.org
NeedsCompilation: no
Packaged: 2016-04-18 10:06:37 UTC; hornik
Author: Pavel N. Krivitsky [aut, cre],
Steven M. Goodreau [ctb],
Martina Morris [ctb],
Kirk Li [ctb],
Emily N. Beylerian [ctb]
Maintainer: Pavel N. Krivitsky <pavel@uow.edu.au>
Repository: CRAN
Date/Publication: 2016-04-19 08:59:42

● Data Source: CranContrib
● 0 images, 13 functions, 0 datasets
● Reverse Depends: 0