Package: DSsim
Depends: graphics, splancs, mrds, mgcv, shapefiles, methods
Suggests: testthat, parallel, knitr, rmarkdown
Type: Package
Title: Distance Sampling Simulations
Version: 1.0.5
Date: 2016-06-17
LazyLoad: yes
Author: Laura Marshall <lhm@st-and.ac.uk>
Maintainer: Laura Marshall <lhm@st-and.ac.uk>
Description: Performs distance sampling simulations. It repeatedly
generates instances of a user defined population within a given survey
region, generates realisations of a survey design (currently these must
be pregenerated using Distance software <http://distancesampling.org/>) and
simulates the detection process. The data are then analysed
so that the results can be compared for accuracy and precision
across all replications. This will allow users to select survey
designs which will give them the best accuracy and precision
given their expectations about population distribution. Any uncertainty in
population distribution or population parameters can be included by running
the different survey designs for a number of different population
descriptions. An example simulation can be found in the help file
for make.simulation.
License: GPL (>= 2)
Collate: 'DDF.Data.R' 'generic.functions.R' 'DDF.Analysis.R'
'DS.Analysis.R' 'Survey.Design.R' 'PT.Design.R'
'PT.Systematic.Design.R' 'PT.Random.Design.R' 'LT.Design.R'
'LT.User.Specified.Design.R' 'LT.EqSpace.ZZ.Design.R'
'LT.EqAngle.ZZ.Design.R' 'LT.Random.Design.R'
'LT.Systematic.Design.R' 'Density.R' 'Population.Description.R'
'Region.R' 'Region.Table.R' 'Sample.Table.R' 'Obs.Table.R'
'Single.Obs.DDF.Data.R' 'Transect.R' 'Line.Transect.R'
'Detectability.R' 'Population.R' 'LT.Survey.Results.R'
'Survey.Results.R' 'DSM.Analysis.R' 'Simulation.R'
'Class.Constructors.R' 'Design.Summary.R' 'Survey.R'
'LT.Survey.R' 'Point.Transect.R' 'PT.Survey.R'
'Population.Summary.R' 'Simulation.Summary.R'
'Single.Obs.LT.Survey.R' 'Single.Obs.PT.Survey.R'
'accumulate.PP.results.R' 'add.dist.error.R'
'add.summary.results.R' 'calc.area.R'
'calc.poss.detect.dists.lines.R'
'calc.poss.detect.dists.points.R' 'check.intersection.R'
'check.shapefile.R' 'coords.from.shapefile.R' 'create.bins.R'
'data.for.distance.R' 'description.summary.R'
'generate.pop.D.R' 'generate.pop.N.R' 'get.ave.density.R'
'get.bound.box.R' 'get.line.sampler.info.R'
'get.point.sampler.info.R' 'get.shapefile.names.R'
'get.surface.constant.R' 'get.surface.gam.R' 'hn.detect.R'
'hr.detect.R' 'in.polygons.R' 'is.gap.R'
'modify.strata.for.analysis.R' 'rename.duplicates.R'
'save.sim.results.R' 'simulate.detections.R'
'single.simulation.loop.R' 'store.ddf.results.R'
'store.dht.results.R' 'uf.detect.R'
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-06-20 11:13:22 UTC; laura
Repository: CRAN
Date/Publication: 2016-06-20 20:25:41
Package: RPyGeo
Type: Package
Title: ArcGIS Geoprocessing in R via Python
Version: 0.9-3
Date: 2011-09-07
Author: Alexander Brenning
Maintainer: Alexander Brenning <brenning@uwaterloo.ca>
Description: Provide access to (virtually any) ArcGIS Geoprocessing
tool from within R by running Python geoprocessing scripts
without writing Python code or touching ArcGIS. Requires ArcGIS
>=9.2, a suitable version of Python (for ArcGIS 9.2: Python
2.4; for ArcGIS 10.0: 2.6), and Windows.
License: GPL
Depends: shapefiles, RSAGA
SystemRequirements: Windows, Python (>= 2.4.0), ArcGIS (>= 9.2)
Packaged: 2012-10-29 08:57:32 UTC; ripley
OS_type: windows
Repository: CRAN
Date/Publication: 2012-10-29 08:57:32
X-CRAN-Original-OS_type: windows
Package: RSAGA
Type: Package
Title: SAGA Geoprocessing and Terrain Analysis in R
Version: 0.94-5
Date: 2015-12-23
Author: Alexander Brenning and Donovan Bangs
Maintainer: Alexander Brenning <alexander.brenning@uni-jena.de>
Description: Provides access to geocomputing and terrain analysis
functions of the geographical information system (GIS) 'SAGA' (System for
Automated Geoscientific Analyses) from within R by running the command
line version of SAGA. This package furthermore provides several R functions
for handling ASCII grids, including a flexible framework for applying local
functions (including predict methods of fitted models) and focal functions to
multiple grids. SAGA GIS is available under GPLv2 / LGPLv2 licence from
http://sourceforge.net/projects/saga-gis/.
License: GPL-2 | file LICENSE
SystemRequirements: SAGA GIS (2.0.4 - 2.2.3)
Depends: R (>= 2.10), gstat, shapefiles, plyr
Suggests: knitr
LazyLoad: yes
Collate: 'gridtools.R' 'RSAGA-core.R' 'RSAGA-modules.R' 'RSAGA-utils.R'
'RSAGA-package.R' 'landslides.R'
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-12-23 13:17:11 UTC; Donovan
Repository: CRAN
Date/Publication: 2016-01-05 09:34:50
Package: BayesX
Type: Package
Title: R Utilities Accompanying the Software Package BayesX
Version: 0.2-9
Date: 2014-08-18
Author: Thomas Kneib, Felix Heinzl, Andreas Brezger, Daniel Sabanes Bove, Nadja Klein
Maintainer: Thomas Kneib <tkneib@uni-goettingen.de>
Description: This package provides functionality for exploring and visualising estimation results
obtained with the software package BayesX for structured additive regression. It also provides
functions that allow to read, write and manipulate map objects that are required in spatial analyses
performed with BayesX, a free software for estimating structured additive regression models
(http://www.bayesx.org).
Depends: shapefiles
Imports: sp, maptools, colorspace (>= 0.97), coda, splines
Suggests: spdep, akima, gpclib, rgeos
LazyLoad: yes
License: GPL-2
Packaged: 2014-08-18 13:26:40 UTC; tkneib
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-08-18 16:46:47
Package: fossil
Type: Package
Title: Palaeoecological and Palaeogeographical Analysis Tools
Version: 0.3.7
Date: 2012-03-29
Author: Matthew J. Vavrek <matthew@matthewvavrek.com>
Maintainer: Matthew J. Vavrek <matthew@matthewvavrek.com>
Depends: sp, maps, shapefiles
Description: A set of analytical tools useful in analysing ecological
and geographical data sets, both ancient and modern. The
package includes functions for estimating species richness
(Chao 1 and 2, ACE, ICE, Jacknife), shared species/beta
diversity, species area curves and geographic distances and
areas.
License: GPL (>= 2)
URL: http://matthewvavrek.com/programs-and-code/fossil/
Packaged: 2012-03-30 06:18:50 UTC; matthew
Repository: CRAN
Date/Publication: 2012-03-30 07:54:11
Package: aspace
Type: Package
Title: A collection of functions for estimating centrographic
statistics and computational geometries for spatial point
patterns
Version: 3.2
Date: 2012-08-08
Author: Randy Bui, Ron N. Buliung, Tarmo K. Remmel
Maintainer: Ron N. Buliung <ron.buliung@utoronto.ca>
Description: A collection of functions for computing centrographic
statistics (e.g., standard distance, standard deviation
ellipse, standard deviation box) for observations taken at
point locations. Separate plotting functions have been
developed for each measure. Users interested in writing results
to ESRI shapefiles can do so by using results from aspace
functions as inputs to the convert.to.shapefile and
write.shapefile functions in the shapefiles library. The aspace
library was originally conceived to aid in the analysis of
spatial patterns of travel behaviour (see Buliung and Remmel,
2008). Major changes in the current version include (1) removal
of dependencies on several external libraries (e.g., gpclib,
maptools, sp), (2) the separation of plotting and estimation
capabilities, (3) reduction in the number of functions, and (4)
expansion of analytical capabilities with additional functions
for descriptive analysis and visualization (e.g., standard
deviation box, centre of minimum distance, central feature).
License: GPL (>= 2)
Depends: R (>= 2.15.1), splancs, Hmisc, shapefiles
LazyData: yes
Packaged: 2012-08-13 19:43:52 UTC; Randy Bui
Repository: CRAN
Date/Publication: 2012-08-14 12:37:42
providing 
.