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Package: csaw
Version: 1.6.1
Date: 2016-03-12
Title: ChIP-Seq Analysis with Windows
Author: Aaron Lun <alun@wehi.edu.au>, Gordon Smyth <smyth@wehi.edu.au>
Maintainer: Aaron Lun <alun@wehi.edu.au>
Depends: R (>= 3.3.0), GenomicRanges, SummarizedExperiment (>= 1.1.6)
Imports: Rsamtools, edgeR, limma, GenomicFeatures, AnnotationDbi,
methods, S4Vectors, IRanges, GenomeInfoDb, BiocGenerics,
Rhtslib, stats
Suggests: org.Mm.eg.db, TxDb.Mmusculus.UCSC.mm10.knownGene
biocViews: MultipleComparison, ChIPSeq, Normalization, Sequencing,
Coverage, Genetics, Annotation, DifferentialPeakCalling
Description: Detection of differentially bound regions in ChIP-seq data
with sliding windows, with methods for normalization and proper
FDR control.
License: GPL-3
NeedsCompilation: yes
LinkingTo: Rhtslib, zlibbioc
Packaged: 2016-05-26 04:56:29 UTC; biocbuild
● Data Source:
BioConductor
● BiocViews: Annotation, ChIPSeq, Coverage, DifferentialPeakCalling, Genetics, MultipleComparison, Normalization, Sequencing
●
5 images,
29 functions,
0 datasets
●
Reverse Depends: 0
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providing 
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