seqbias : Estimation of per-position bias in high-throughput sequencing data

Package: seqbias
Version: 1.20.0
Date: 25-12-2010
Title: Estimation of per-position bias in high-throughput sequencing
data
Description: This package implements a model of per-position sequencing
bias in high-throughput sequencing data using a simple Bayesian
network, the structure and parameters of which are trained on a
set of aligned reads and a reference genome sequence.
Author: Daniel Jones <dcjones@cs.washington.edu>
Maintainer: Daniel Jones <dcjones@cs.washington.edu>
Depends: R (>= 2.13.0), GenomicRanges (>= 0.1.0), Biostrings (>=
2.15.0), methods
LinkingTo: Rsamtools (>= 1.19.38)
Imports: zlibbioc
Suggests: Rsamtools, ggplot2
LazyLoad: yes
License: LGPL-3
biocViews: Sequencing
NeedsCompilation: yes
Packaged: 2016-05-04 03:54:59 UTC; biocbuild