A dataset used in example of sARTP.

Description

A data frame ref.geno with genotypes of 503 observations on 2654 SNPs. The genotypes are encoded by SNPs' minor and major alleles so that this data frame can be used as reference of function sARTP.

Usage

data(ref.geno)

Examples

  data(ref.geno)
  head(ref.geno[, 1:5])

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(ARTP2)
Loading required package: Formula
Loading required package: data.table
Loading required package: parallel
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/ARTP2/ref.geno.Rd_%03d_medium.png", width=480, height=480)
> ### Name: ref.geno
> ### Title: A dataset used in example of 'sARTP'.
> ### Aliases: ref.geno
> ### Keywords: datasets
> 
> ### ** Examples
> 
>   data(ref.geno)
>   head(ref.geno[, 1:5])
        rs10864787 rs11122616 rs1202526 rs1202527 rs1202531
HG00096         AA         GA        CA        GG        GA
HG00097         AA         GA        AA        GG        GA
HG00099         TA         GA        CA        GG        AA
HG00100         AA         AA        AA        AG        GG
HG00101         TA         AA        AA        GG        GA
HG00102         AA         GA        CC        GG        AA
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>