R: SSU Amplicon Frequencies Of Different Sampling Sites
ampliconfreqs.long
R Documentation
SSU Amplicon Frequencies Of Different Sampling Sites
Description
A data frame with 16 amplicon data sets taken from 8 different sampling sites.
Samples from each sampling site were sequenced twice, corresponding to sets A and B (e.g. column FU25.A and FU25.B).
Names of the sampling sites are specified in the data site.f.
Usage
data(ampliconfreqs.long)
Format
A data frame with 80903 observations on the following 16 variables.
FU25.A
a numeric vector
FU25.B
a numeric vector
FU28.A
a numeric vector
FU28.B
a numeric vector
FU31.A
a numeric vector
FU31.B
a numeric vector
FU31.C
a numeric vector
FU31.D
a numeric vector
FU34.A
a numeric vector
FU34.B
a numeric vector
FU37.A
a numeric vector
FU37.B
a numeric vector
UniPond.A
a numeric vector
UniPond.B
a numeric vector
BogSoil.A
a numeric vector
BogSoil.B
a numeric vector
References
Lange A, Jost S, Heider D, Bock C, Budeus B, Schilling E, Strittmatter A, Boenigk J, Hoffmann D: AmpliconDuo: A Split-Sample Filtering Protocol for High-Throughput Amplicon Sequencing of Microbial Communities.
(PLoS One. 2015 Nov 2;10(11))