Sample expression matrix and phenotype data.frames.

Description

The geneData data.frame has 500 rows and 26 columns. It consists of a subset of real expression data from an Affymetrix U95v2 chip. The data are anonymous. The covariate data geneCov and geneCovariate are made up. The standard error data seD is also made up.

Usage

data(geneData)

Format

A 500 by 26 data frame.

Source

The J. Ritz Laboratory (S. Chiaretti).

Examples

data(geneData)
data(geneCovariate)
data(seD)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(Biobase)
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/Biobase/data.geneData.Rd_%03d_medium.png", width=480, height=480)
> ### Name: data:geneData
> ### Title: Sample expression matrix and phenotype data.frames.
> ### Aliases: data:geneData geneData data:geneCov geneCov data:geneCovariate
> ###   geneCovariate data:seD seD
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(geneData)
> data(geneCovariate)
> data(seD)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>