The gmt files included in GeoDE

Description

This list contains the names of all the GMT files included in GeoDE.

Usage

data(AllGMTfiles)

Format

The format is: chr "AllGMTfiles"

Source

Chen, Edward Y., et al. "Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool." BMC bioinformatics 14.1 (2013): 128.

Examples

# load the GMT file data

data(AllGMTfiles)

# load the first gmt file in the list

data(list=AllGMTfiles[[1]])


## maybe str(AllGMTfiles) ; plot(AllGMTfiles) ...

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(GeoDE)
Loading required package: Matrix
Loading required package: MASS
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/GeoDE/AllGMTfiles.Rd_%03d_medium.png", width=480, height=480)
> ### Name: AllGMTfiles
> ### Title: The gmt files included in GeoDE
> ### Aliases: AllGMTfiles
> ### Keywords: datasets
> 
> ### ** Examples
> 
> # load the GMT file data
> 
> data(AllGMTfiles)
> 
> # load the first gmt file in the list
> 
> data(list=AllGMTfiles[[1]])
> 
> 
> ## maybe str(AllGMTfiles) ; plot(AllGMTfiles) ...
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>