The currently loaded gmtfile

Description

When a GMT file is loaded e.g. by data("GeneOntology_BP.gmt") the gmt file is stored in the variable gmt

Usage

gmt

Format

The format is alist of character variables defining gene sets and their labels (first element).

Examples

data("GeneOntology_BP.gmt")
## maybe str(gmt) ; plot(gmt) ...

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(GeoDE)
Loading required package: Matrix
Loading required package: MASS
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/GeoDE/gmt.Rd_%03d_medium.png", width=480, height=480)
> ### Name: gmt
> ### Title: The currently loaded gmtfile
> ### Aliases: gmt
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data("GeneOntology_BP.gmt")
> ## maybe str(gmt) ; plot(gmt) ...
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>