Last data update: 2014.03.03

R: MAGNETIC RESONANCE IMAGING TEST (MRI) for evaluation of lymph...
MRIR Documentation

MAGNETIC RESONANCE IMAGING TEST (MRI) for evaluation of lymph node metastasis in women with invasive cervical cancer

Description

This dataset gives the observed cross-tabulation of the MRI (test under evaluation) and histologic/cytologic specimens obtained by surgery or lymph node biopsy (reference test).

Usage

data(MRI)

Format

A matrix with 10 observations on the following 4 variables.

++

Observed individuals who tested positive on both tests

+-

Observed individuals who tested positive on the test under evaluation and negative on the reference test

-+

Observed individuals who tested negative on the test under evaluation and positive on the reference test

---

Observed individuals who tested negative on both tests

References

Scheidler J, Hricak H, Yu KK, Subak L, Segal MR. Radiological evaluation of lymph node metastases in patients with cervical cander : a meta-analysis. Journal of the American Medical Association 1997 ; 278(13):1096-1101.

C. M. Rutter and C. A. Gatsonis. A hierarchical regression approach to meta-analysis of diagnostic accuracy evaluations. Statistics in Medicine 2001 ; 20(19):2865-2884.

Examples

data(MRI)
MRI

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(HSROC)
Loading required package: lattice
Loading required package: coda
Loading required package: MASS
Loading required package: MCMCpack
##
## Markov Chain Monte Carlo Package (MCMCpack)
## Copyright (C) 2003-2016 Andrew D. Martin, Kevin M. Quinn, and Jong Hee Park
##
## Support provided by the U.S. National Science Foundation
## (Grants SES-0350646 and SES-0350613)
##
##
## Hierarchical Summary Receiver Operating Characteristic package (HSROC)
## Copyright (C) 2010-2016 Ian Schiller and Nandini Dendukuri 
##
## Development of HSROC package was supported by grants from the 
## Canadian Institutes of Health Research (MOP #89857) 
## and the Fonds de la Recherche en Sant<U+00E9> Qu<U+00E9>bec. 
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/HSROC/MRI.Rd_%03d_medium.png", width=480, height=480)
> ### Name: MRI
> ### Title: MAGNETIC RESONANCE IMAGING TEST (MRI) for evaluation of lymph
> ###   node metastasis in women with invasive cervical cancer
> ### Aliases: MRI
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(MRI)
> MRI
   ++ +- -+  --
1   9  2  2  44
2   3  6  5  32
3   3  2  1  16
4   3  1 12  44
5   1  1  6  16
6   7  2 22 167
7  12  4  4  29
8  23  5 14 230
9   8  5  5  53
10 16  2  2  22
> 
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>