Predefinitions of node or edge types

Description

The KGML files define node and edge type and subtypes, which are summarized in these data frames.

Usage

data(KEGGEdgeSubtype)
data(KEGGNodeType)
data(KEGGEdgeType)

Format

They are stored as data frames

Details

They are used by graph render functions to identify different types of objects, user could use them to classify edges or nodes.

References

KGML Document manual http://www.genome.jp/kegg/docs/xml/

Examples

data(KEGGEdgeSubtype)
data(KEGGEdgeType)
data(KEGGNodeType)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(KEGGgraph)

Attaching package: 'KEGGgraph'

The following object is masked from 'package:graphics':

    plot

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/KEGGgraph/KEGGEdgeSubtype.Rd_%03d_medium.png", width=480, height=480)
> ### Name: KEGGEdgeSubtype
> ### Title: Predefinitions of node or edge types
> ### Aliases: KEGGEdgeType KEGGNodeType KEGGEdgeSubtype
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(KEGGEdgeSubtype)
> data(KEGGEdgeType)
> data(KEGGNodeType)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>