This is a data frame based on the TCGA "mutation annotation file" format.
Usage
data(NGStestdata)
Format
A data frame with 72,111 observations on the following 5 variables:
Chrom
a character vector that indicates the chromosome identifier
without the "chr" prefix: "1", "2", ..., "22", "X", "Y"
Start_Position
a numeric vector
End_Position
a numeric vector
Variant_Type
a character vector that indicates the
type of variant; legal values are "SNP", "INS" and "DEL". Other
values will cause the Compute.input.variables to generate an error
Tumor_Sample_Barcode
the sample ID as a character vector
Any other columns are ignored.
Details
This is sample input data for the Compute.input.variables function.