R: Table of Mutation Numbers in Train Set Samples
train.mutationNum | R Documentation |
Table of Mutation Numbers in Train Set Samples
Description
This is a data frame containing the counts of 9 mutation types for each sample in NGStraindata . It was generated from Compute.input.variables
Usage
data(train.mutationNum)
Format
A data frame with 361 observations on the following 9 variables:
T.sns total count of SNSs/Mb
S.sns count of SNSs in simple sequence repeats/Mb
T.ind total count of indels/Mb
S.ind count of indels in simple sequence repeats/Mb
T total mutation count/Mb
S mutation count in simple sequence repeats/Mb
ratio.sns S.sns/T.sns
ratio.ind S.ind/T.ind
ratio S/T
Details
This is the sample data for MSIseq.train function input.
Source
https://tcga-data.nci.nih.gov/tcga/
Results
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