Last data update: 2014.03.03

R: Imputed SNP dataset
snps.imputedR Documentation

Imputed SNP dataset

Description

A toy dataset of three imputed SNP, for 150 individuals. For each individuals, and for each SNP, the first column is the probability of a minor allele homozygote genotype (genotype “0”), the second column is the probability of an heterozygote genotype (genotype “1”) and the third and last column is the probability of a major allele homozygote (genotype “2”).

Usage

data(snps.imputed)

Format

A matrix of 150 rows and nine columns.

Examples

data(snps.imputed)

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(MultiPhen)
Loading required package: MASS
Loading required package: abind
Loading required package: epitools
Loading required package: meta
Loading 'meta' package (version 4.4-1).
> png(filename="/home/ddbj/snapshot/RGM3/R_CC/result/MultiPhen/snps.imputed.Rd_%03d_medium.png", width=480, height=480)
> ### Name: snps.imputed
> ### Title: Imputed SNP dataset
> ### Aliases: snps.imputed
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(snps.imputed)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>