R: Flow cytometry data to test SamSPECTRAL algorithm.
small
R Documentation
Flow cytometry data to test SamSPECTRAL algorithm.
Description
This FCS file is a small one used to show how to set SamSPECTRAL parameters.
Usage
data(small_data)
Format
This is an FCS file.
References
Zare, H. and Shooshtari, P. and Gupta, A. and Brinkman R.B: Data Reduction for Spectral Clustering to Analyse High Throughput Flow Cytometry Data. BMC Bioinformatics, 2010, 11:403.
Examples
data(small_data)
full <- small
plot(full, pch='.')
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(SamSPECTRAL)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/SamSPECTRAL/small.Rd_%03d_medium.png", width=480, height=480)
> ### Name: small
> ### Title: Flow cytometry data to test SamSPECTRAL algorithm.
> ### Aliases: small
> ### Keywords: datasets
>
> ### ** Examples
>
> data(small_data)
> full <- small
>
> plot(full, pch='.')
>
>
>
>
>
>
> dev.off()
null device
1
>