Genetic Investigation of ANthropometric Traits (GIANT) consortium
data contain P-values of 2.7 million SNPs with six anthropometric
traits that are well established to represent body size and shape:
height, weight, BMI, waist circumference (WC), hip
circumference(HIP). The data is downloadable from
https://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files
We mapped SNPs on gene LCORL, RASA2, STK33 and RPGRIP1L. This subdata
contains P values, correlation matrices for demostrated example of
MTaSPUsSet test.
Usage
data(someGs)
References
Shungin D, Winkler TW, Croteau-Chonka DC, Ferreira T, Locke AE, Magi R,
Strawbridge R, Pers TH, Fischer K, Justice AE, Workalemahu T, Wu JM, et
al. (2015). New genetic loci link adipose and insulin biology to body
fat distribution. Nature 518: 187-196.
Examples
data(someGs)
## P-values for LCORL
someGs$LCORL[[1]]
## correlation matrix for LCORL
someGs$LCORL[[2]]
## P-values for RASA2
someGs$RASA2[[1]]
## correlation matrix for LCORL
someGs$RASA2[[2]]
# See vignettes for more details.