Last data update: 2014.03.03

R: Hg19 ideogram without cytoband information...
hg19IdeogramR Documentation

Hg19 ideogram without cytoband information...

Description

Hg19 ideogram without cytoband information

Usage

data(hg19Ideogram)

Details

This data set provides hg19 genome information wihout cytoband information.

Examples

data(hg19Ideogram)
hg19Ideogram

Results


R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(biovizBase)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/biovizBase/hg19Ideogram.Rd_%03d_medium.png", width=480, height=480)
> ### Name: hg19Ideogram
> ### Title: Hg19 ideogram without cytoband information...
> ### Aliases: hg19Ideogram hg19Ideogram
> ### Keywords: datasets
> 
> ### ** Examples
> data(hg19Ideogram)
> hg19Ideogram
GRanges object with 93 ranges and 0 metadata columns:
                   seqnames         ranges strand
                      <Rle>      <IRanges>  <Rle>
   [1]                 chr1 [1, 249250621]      *
   [2] chr1_gl000191_random [1,    106433]      *
   [3] chr1_gl000192_random [1,    547496]      *
   [4]                 chr2 [1, 243199373]      *
   [5]                 chr3 [1, 198022430]      *
   ...                  ...            ...    ...
  [89]       chrUn_gl000246     [1, 38154]      *
  [90]       chrUn_gl000247     [1, 36422]      *
  [91]       chrUn_gl000248     [1, 39786]      *
  [92]       chrUn_gl000249     [1, 38502]      *
  [93]                 chrM     [1, 16571]      *
  -------
  seqinfo: 93 sequences from hg19 genome
> 
> 
> 
> 
> dev.off()
null device 
          1 
>