This data set provides hg19 genome information with cytoband
information.
Examples
data(hg19IdeogramCyto)
hg19IdeogramCyto
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
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Type 'demo()' for some demos, 'help()' for on-line help, or
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> library(biovizBase)
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/biovizBase/hg19IdeogramCyto.Rd_%03d_medium.png", width=480, height=480)
> ### Name: hg19IdeogramCyto
> ### Title: Hg19 ideogram with cytoband information...
> ### Aliases: hg19IdeogramCyto hg19IdeogramCyto
> ### Keywords: datasets
>
> ### ** Examples
> data(hg19IdeogramCyto)
> hg19IdeogramCyto
GRanges object with 862 ranges and 2 metadata columns:
seqnames ranges strand | name gieStain
<Rle> <IRanges> <Rle> | <factor> <factor>
[1] chr1 [ 0, 2300000] * | p36.33 gneg
[2] chr1 [2300000, 5400000] * | p36.32 gpos25
[3] chr1 [5400000, 7200000] * | p36.31 gneg
[4] chr1 [7200000, 9200000] * | p36.23 gpos25
[5] chr1 [9200000, 12700000] * | p36.22 gneg
... ... ... ... . ... ...
[858] chrY [15100000, 19800000] * | q11.221 gpos50
[859] chrY [19800000, 22100000] * | q11.222 gneg
[860] chrY [22100000, 26200000] * | q11.223 gpos50
[861] chrY [26200000, 28800000] * | q11.23 gneg
[862] chrY [28800000, 59373566] * | q12 gvar
-------
seqinfo: 24 sequences from an unspecified genome; no seqlengths
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> dev.off()
null device
1
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