Dataset with annotation of CG identifiers

Description

See the complete vignette End-to-end analysis of cell-based screens: from raw intensity readings to the annotated hit list, Section Using biomaRt to annotate the target genes online for details. The annotations were obtained on 8 September 2006.

Usage

data(bdgpbiomart)

Format

Dataframe with 21888 rows and 11 columns Plate, Well, HFAid, GeneID, chr_name, chrom_start, chrom_end, description, flybase_name, go_id, go_description.

Source

BioMart web interface to Ensembl 37.

Examples

    data(bdgpbiomart)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

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> library(cellHTS)
Loading required package: grid
Warning message:
Package 'cellHTS' is deprecated and will be removed from Bioconductor
  version 3.4. Please consider using 'cellHTS2' which offers better
  functionality for working with multiple screens and with
  multi-channel screens. 
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/cellHTS/bdgpbiomart.Rd_%03d_medium.png", width=480, height=480)
> ### Name: bdgpbiomart
> ### Title: Dataset with annotation of CG identifiers
> ### Aliases: bdgpbiomart
> ### Keywords: datasets
> 
> ### ** Examples
> 
>     data(bdgpbiomart)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>