Object of class 'CNSet'

Description

The data for the first 16 polymorphic markers in the HapMap analysis.

Usage

data(cnSetExample)
data(cnSetExample2)

Format

The data illustrates the CNSet-class, with assayData containing the quantile-normalized intensities for the A and B alleles, genotype calls and confidence scores.

Details

This object was created from the copynumber vignette in inst/scripts. A subset of markers was selected to keep the package size small.

Examples

     data(cnSetExample)
     data(cnSetExample2)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(crlmm)
Loading required package: oligoClasses
Welcome to oligoClasses version 1.34.0
Loading required package: preprocessCore
Welcome to crlmm version 1.30.0
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/crlmm/cnSetExample.Rd_%03d_medium.png", width=480, height=480)
> ### Name: cnSetExample
> ### Title: Object of class 'CNSet'
> ### Aliases: cnSetExample cnSetExample2
> ### Keywords: datasets
> 
> ### ** Examples
> 
>      data(cnSetExample)
>      data(cnSetExample2)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>