R: A flowClust model fitted to the rituximab data for 1:10...
flowClust.res
R Documentation
A flowClust model fitted to the rituximab data for 1:10 clusters.
Description
The Rituximab data set accessible via data(rituximab) in the flowClust package fitted to a flowClust model containing from one to ten components. The results are in the object flowClust.res.
Usage
data(RituximabFlowClustFit)
Format
The format is:
flowClust.res is a flowClustList, where each element of the list is a flowClust model of the rituximab data, for K=1 through K=10 components, respectively. The structure of flowClustList and flowClust can be found in the corresponding documentation of the flowClust package. The format of the rituximab data is found in the documentation for that data set.
Details
The models have been precomputed for use in flowMerge examples to save computation time. flowClust was called on the rituximab data to generate these models with the following command: flowClust.res<-flowClust(rituximab,K=1:10,B=1000,B.init=100,tol=1e-5,tol.init=1e-2,nu=4,randomStart=50,trans=1,nu.est=1).
Source
Gasparetto, M., Gentry, T., Sebti, S., O'Bryan, E., Nimmanapalli,
R., Blaskovich, M. A., Bhalla, K., Rizzieri, D., Haaland, P.,
Dunne, J. and Smith, C. (2004) Identification of compounds that
enhance the anti-lymphoma activity of rituximab using flow
cytometric high-content screening. J. Immunol. Methods292,
59-71.