Entrez identifiers for CD4-TCells example

Description

This dataset contains the entrez identifiers CD4EntrezIds and their associated GO Terms CD4GOTermsFrame and CD4GOTermsList corresponding to the list of differentially expressed genes in a study by Henkel et al.

Usage

data(CD4Ids)

Source

Hengel, R.L. and Thaker, V. and Pavlick, M.V. and Metcalf, J.A. and Dennis, G. Jr. and Yang, J. and Lempicki, R.A. and Sereti, I. and Lane, H.C. (2003). L-selectin (CD62L) expression distinguishes small resting memory CD4+ T cells that preferentially respond to recall antigen. J. Immunol., 170, 28-32. (2003)

Examples

data(CD4Ids)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(goProfiles)
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    colMeans, colSums, expand.grid, rowMeans, rowSums

Loading required package: GO.db

> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/goProfiles/CD4ids.Rd_%03d_medium.png", width=480, height=480)
> ### Name: CD4Ids
> ### Title: Entrez identifiers for CD4-TCells example
> ### Aliases: CD4LLids CD4GOTermsFrame CD4GOTermsList
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(CD4Ids)
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>