The expression data are real but anonymized. The data are from an experiment
that used Affymetrix U95v2 chips. The data were processed by dChip and then
exported to R for analysis. The data illustrate ExpressionSet-class, with
assayData containing the required matrix element exprs and an additional matrix
se.exprs. se.exprs has the same dimensions as exprs. The phenoData and
standard error estimates (se.exprs) are made up. The information in
the "description" slot is fake.
Details
The data for 26 cases, labeled A to Z and 500 genes. Each case has three
covariates: sex (male/female); type (case/control); and score (testing score).
Examples
data(expr)
Results
R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(interactiveDisplay)
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from 'package:stats':
IQR, mad, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
rbind, rownames, sapply, setdiff, sort, table, tapply, union,
unique, unsplit
Loading required package: grid
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/interactiveDisplay/expr.Rd_%03d_medium.png", width=480, height=480)
> ### Name: expr
> ### Title: An Example ExpressionSet object
> ### Aliases: expr
> ### Keywords: datasets
>
> ### ** Examples
>
> data(expr)
>
>
>
>
>
> dev.off()
null device
1
>