Data from Kristensen et al. 2012

Description

Triplicated experimental data from Kristensen et al. 2012, A high-throughput approach for measuring temporal changes in the interactome. Protein complexes were separated by size exclusion chromatography and protein were quantified using SILAC.

Usage

data("kristensen2012r1")
data("kristensen2012r2")
data("kristensen2012r3")

References

Kristensen AR, Gsponer J, Foster LJ. A high-throughput approach for measuring temporal changes in the interactome. Nat Methods. 2012 Sep;9(9):907-9. doi: 10.1038/nmeth.2131. Epub 2012 Aug 5. PubMed PMID: 22863883; PubMed Central PMCID: PMC3954081.

Examples

data(kristensen2012r1)
experimentData(kristensen2012r1)

Results

R version 3.3.1 (2016-06-21) -- "Bug in Your Hair"
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Platform: x86_64-pc-linux-gnu (64-bit)

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> library(pRolocdata)
Loading required package: MSnbase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit

Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: mzR
Loading required package: Rcpp
Loading required package: BiocParallel
Loading required package: ProtGenerics

This is MSnbase version 1.20.7 
  Read '?MSnbase' and references therein for information
  about the package and how to get started.


Attaching package: 'MSnbase'

The following object is masked from 'package:stats':

    smooth

The following object is masked from 'package:base':

    trimws


This is pRolocdata version 1.10.0.
Use 'pRolocdata()' to list available data sets.
> png(filename="/home/ddbj/snapshot/RGM3/R_BC/result/pRolocdata/kristensen2012.Rd_%03d_medium.png", width=480, height=480)
> ### Name: kristensen2012r1
> ### Title: Data from Kristensen et al. 2012
> ### Aliases: kristensen2012r1 kristensen2012r2 kristensen2012r3
> ###   kristensen2012
> ### Keywords: datasets
> 
> ### ** Examples
> 
> data(kristensen2012r1)
> experimentData(kristensen2012r1)
Experiment data
  Experimenter name: Kristensen AR, Gsponer J and Foster LJ 
  Laboratory:  
  Contact information:  
  Contact email:  
  Title: A high-throughput approach for measuring temporal changes in the interactome. 
  URL:  
  PMIDs: 22863883 

  Abstract: A 68 word abstract is available. Use 'abstract' method.
  Information is available on: samples 
  notes:
   Quantification:
SILAC
   Fractionation:
Size Exclusion Chromatography
> 
> 
> 
> 
> 
> dev.off()
null device 
          1 
>