R: Taxonomic Classification and Phylogeny of Dune Meadow Species
dune.taxon
R Documentation
Taxonomic Classification and Phylogeny of Dune Meadow Species
Description
Classification table of the species in the dune data
set.
Usage
data(dune.taxon)
data(dune.phylodis)
Format
dune.taxon is data frame with 30 species (rows) classified
into five taxonomic levels (columns). dune.phylodis is a
dist object of estimated coalescence ages extracted
from http://datadryad.org/resource/doi:10.5061/dryad.63q27
(Zanne et al. 2014) using tools in packages ape and
phylobase.
Details
The classification of vascular plants is based on APG (2009), and
that of mosses on Hill et al. (2006).
References
APG [Angiosperm Phylogeny Group] (2009) An update of the Angiosperm
Phylogeny Group classification for the orders and families of flowering
plants: APG III. Bot. J. Linnean Soc.161: 105–121.
Hill, M.O et al. (2006) An annotated checklist of the mosses of Europe
and Macaronesia. J. Bryology28: 198–267.
Zanne A.E., Tank D.C., Cornwell, W.K., Eastman J.M., Smith, S.A.,
FitzJohn, R.G., McGlinn, D.J., OâMeara, B.C., Moles, A.T., Reich,
P.B., Royer, D.L., Soltis, D.E., Stevens, P.F., Westoby, M., Wright,
I.J., Aarssen, L., Bertin, R.I., Calaminus, A., Govaerts, R.,
Hemmings, F., Leishman, M.R., Oleksyn, J., Soltis, P.S., Swenson,
N.G., Warman, L. & Beaulieu, J.M. (2014) Three keys to the radiation
of angiosperms into freezing environments. Nature 506, 89–92.
See Also
Functions taxondive, treedive,
and treedist use these data sets.