QCReport
(Package: affyQCReport) :
QC Report for AffyBatch objects
Creates a QC report for an object of class AffyBatch.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: QCReport
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affyQAReport
(Package: affyQCReport) :
Generate a QA Report for Affymetrix arrays
These functions provide a method for creating, viewing and removing QA reports on an experiment run on Affymetrix CEL files.
● Data Source:
BioConductor
● Keywords: manip
● Alias: affyQAReport, openQAReport, rmQAReport
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borderQC1
(Package: affyQCReport) :
Distribution of intensities of the border elements
Creates the forth page of the QC report created by QCReport for an object of class AffyBatch The page contains a boxplots showing the intensities from the border element of arrays in an AffyBatch object.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: borderQC1
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1 images
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borderQC2
(Package: affyQCReport) :
Center of intensity QC plots
Creates the fifth page of the QC report created by QCReport for an object of class AffyBatch The page contains plots showing the center of intensity of the border element of arrays in an AffyBatch object.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: borderQC2
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1 images
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Creates the sixth page of the QC report created by QCReport for an object of class AffyBatch The page displays array-array intensity correlation coefficients.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: QCReport-correlationPlot, correlationPlot
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1 images
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signalDist
(Package: affyQCReport) :
Intensity distribution plots for a AffyBatch object
Creates the secondpage of the QC report created by QCReport for an object of class AffyBatch The page contains a boxplot and intensity distribution plots.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: QCReport-signalDist, signalDist
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1 images
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titlePage
(Package: affyQCReport) :
QC report title page with array names
Creates the titlepage of the QC report created by QCReport for an object of class AffyBatch.
● Data Source:
BioConductor
● Keywords: hplot
● Alias: QCReport-titlePage, titlePage
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