Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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LOGICOILfit (Package: LOGICOIL) :

A nnet object containing the results of fitting a muiltinomial log-linear model via neural network to the LOGICOIL training dataset. It is used to generate the LOGICOIL predictions.
● Data Source: CranContrib
● Keywords: datasets
● Alias: LOGICOILfit
● 0 images

Model_Parameters (Package: LOGICOIL) :

A list containing five elements, each of which are required to run the LOGICOIL prediction algorithm.
● Data Source: CranContrib
● Keywords: datasets
● Alias: Model_Parameters
● 0 images

pssm (Package: LOGICOIL) : Profile scoring matrix derived from the LOGICOIL training set.

This data set contains the Position Specific Scoring Matrix (PSSM) used as the LOGICOIL training set. This dataset was compiled from the CC+ coiled-coil database. This PSSM is used by LOGICOIL to predict the oligomeric state of coiled-coil sequences. More details on the training set can be found in the reference below.
● Data Source: CranContrib
● Keywords: datasets
● Alias: pssm
● 0 images