GOLUBmcs
(Package: PGSEA) :
Molecular Concepts prepared at VAI from data created by Golub et al.
386 molecular concepts generated at VAI. The data these concepts were generate from is available from http://www.broad.mit.edu/cmap/.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: GOLUBmcs
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VAIgsc
(Package: PGSEA) :
Molecular Concepts (Gene Sets) prepared at VAI
A few gene sets compiled at VAI. We have found useful in our analysis.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: VAIgsc
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VAImcs
(Package: PGSEA) :
Molecular Concepts prepared at VAI
A few gene sets compiled at VAI. We have found useful in our analysis.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: VAImcs
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aggregateExprs
(Package: PGSEA) :
Aggregate expression data
This function removes duplicates row names from an expression set, summarizing them with a function of the users choice. The "absMax" function located in package "reb" we have found to be useful.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: aggregateExprs
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nbEset
(Package: PGSEA) :
Reduced Neuroblastoma data set
Neuroblastoma Data set - reduced in size to comply with BioC package guidelines
● Data Source:
BioConductor
● Keywords: datasets
● Alias: nbEset
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