CentromeresHg19 is a data frame providing positions of centromeres on all chromosomes of human genome 19 and its sizes. Size of centromere is also approximated in WinSize column to allow proper visualization of particular chromosomes.
FatherRareVariantsChr21 is a data frame consisting of annotated genomic variants coming from CompleteGenomics whole genome sequencing. Variants were filtered from GIAB Ashkenazim Trio father file using following filters: dbSNP frequency < 0.01, coding, nonsynonymous or nonsense variant, sequencing depth > 10
MotherRareVariantsChr21 is a data frame consisting of annotated genomic variants coming from CompleteGenomics whole genome sequencing. Variants were filtered from GIAB Ashkenazim Trio mother file using following filters: dbSNP frequency < 0.01, coding, nonsynonymous or nonsense variant, sequencing depth > 10
SonRareVariantsChr21
(Package: RareVariantVis) :
Annotated rare variants on the chromosome 21, human genome 19, subset of SonVariantsChr21
SonRareVariantsChr21 is a data frame consisting of annotated genomic variants coming from CompleteGenomics whole genome sequencing. Variants were filtered from SonVariantsChr21 file using following filters: dbSNP frequency < 0.01, coding, nonsynonymous or nonsense variant, sequencing depth > 10