This function determines a warping function for a list of AbstractMassObject objects (warping is also known as phase correction/spectra alignment).
● Data Source:
CranContrib
● Keywords: methods
● Alias: determineWarpingFunctions
●
3 images
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These functions looks for empty AbstractMassObject objects in a list.
● Data Source:
CranContrib
● Keywords: methods
● Alias: findEmptyMassObjects, removeEmptyMassObjects
●
0 images
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This method estimates the noise of mass spectrometry data (represented by a MassSpectrum object).
● Data Source:
CranContrib
● Keywords: methods
● Alias: estimateNoise, estimateNoise,MassSpectrum-method
●
1 images
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trim-methods
(Package: MALDIquant) :
Trim an AbstractMassObject object.
This method trims an AbstractMassObject object. That is useful if some mass ranges should be excluded from further analysis.
● Data Source:
CranContrib
● Keywords: methods
● Alias: trim, trim,AbstractMassObject,numeric-method, trim,list,missing-method, trim,list,numeric-method
●
0 images
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This method estimates the baseline of mass spectrometry data (represented by a MassSpectrum object).
● Data Source:
CranContrib
● Keywords: methods
● Alias: estimateBaseline, estimateBaseline,MassSpectrum-method
●
4 images
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These functions test for a MassSpectrum or MassPeaks object.
● Data Source:
CranContrib
● Keywords: methods
● Alias: isMassPeaks, isMassSpectrum
●
0 images
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This function creates a MassPeaks object. Normally it shouldn't called by the user. Try detectPeaks,MassSpectrum-method instead.
● Data Source:
CranContrib
● Keywords: methods
● Alias: createMassPeaks
●
0 images
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plot-methods
(Package: MALDIquant) :
Plots an AbstractMassObject object.
This is an overloaded method to allow plotting of an AbstractMassObject object.
● Data Source:
CranContrib
● Keywords: Graphics|hplot, methods
● Alias: plot,AbstractMassObject,missing-method, plot,MassSpectrum,missing-method
●
1 images
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MALDIquant-defunct
(Package: MALDIquant) :
Removed Functions/Methods in Package pkg{MALDIquant
These functions/methods are removed.
● Data Source:
CranContrib
● Keywords: internal, misc
● Alias: MALDIquant-defunct
●
0 images
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msiSlices
(Package: MALDIquant) :
Turn a list of AbstractMassObjects into a mass spectrometry imaging
This function turns a mass spectrometry imaging dataset represented by a list of AbstractMassObject objects into an intensityMatrix for each slice (stored in an array).
● Data Source:
CranContrib
● Keywords:
● Alias: msiSlices
●
0 images
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providing 
.