R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
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Functions
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Classification

Results 1 - 10 of 66 found.
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patternMatch (Package: MAMA) :

Funtion counts number of observed soft matches in meta-analysis

● Data Source: CranContrib
● Keywords: nonparametric
● Alias: patternMatch
● 0 images

METRADISC (Package: MAMA) :

This is a wrapper function for meta-analytical method called METRADISC that perform all steps of the analysis and return all the outputs in one line.

● Data Source: CranContrib
● Keywords: univar
● Alias: METRADISC, METRADISC.res
● 0 images

GEDM<--methods (Package: MAMA) : Replacement Methods for code{MetaArray

Each of the methods replaces one slot of an object derived from MetaArray class

● Data Source: CranContrib
● Keywords: methods
● Alias: GEDM<-,MetaArray-method, GEDM<--methods, clinical<-,MetaArray-method, clinical<--methods, datanames<-,MetaArray-method, datanames<--methods
● 0 images

metaMA (Package: MAMA) :

This is a wrapper function for effect size or p-value combination as implemented in metaMA package.

● Data Source: CranContrib
● Keywords: univar
● Alias: metaMA, metaMA.res
● 0 images

metalist.to.matrix (Package: MAMA) :

Function converts list (output from pvalcombination, EScombination, metaMA) to matrix. )

● Data Source: CranContrib
● Keywords: manip
● Alias: metalist.to.matrix
● 0 images

metaheat2 (Package: MAMA) :

Function is modification of function heatmap.2 from package gplots

● Data Source: CranContrib
● Keywords: hplot
● Alias: metaheat2
● 0 images

metaheat (Package: MAMA) : Display Data as Heatmap

This function displays a matrix as a heatmap. It is based on function heatmap_2 in the Heatplus package.

● Data Source: CranContrib
● Keywords: hplot
● Alias: metaheat
● 1 images

metagene (Package: MAMA) :

Function extracts one row (specified by number or name) from all data.frames of input list

● Data Source: CranContrib
● Keywords: manip
● Alias: metagene
● 0 images

MetaArray-class (Package: MAMA) : Class "MetaArray" ~~~

A class created for meta-analysis of microarray

● Data Source: CranContrib
● Keywords: classes
● Alias: MetaArray-class, as.list,MetaArray-method, plot,MetaArray,ANY-method, plot,MetaArray,missing-method, print,MetaArray-method, show,MetaArray-method
● 0 images

meta.test (Package: MAMA) :

Function meta.test returns a list with two slots: data frame of test statistics and data frame of p-values. In each of the matrices rows correspond to genes and columns to data sets.

● Data Source: CranContrib
● Keywords: htest
● Alias: meta.test
● 0 images