Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 32 found.
[1] < 1 2 3 4 > [4]  Sort:

SushiColors (Package: Sushi) : Generates a Sushi color palette

Generates a Sushi color palette
● Data Source: BioConductor
● Keywords:
● Alias: SushiColors
1 images

Sushi_5C.bedpe (Package: Sushi) : Sushi_5C.bedpe

This data set list the genomic locations of 5C interactions in multiple cell lines with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_5C.bedpe
● 0 images

Sushi_ChIAPET_pol2.bedpe (Package: Sushi) : Sushi_ChIAPET_pol2.bedpe

This data set list the genomic locations of Pol2 ChIA PET interactions in K562 cells with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIAPET_pol2.bedpe
● 0 images

Sushi_ChIPExo_CTCF.bedgraph (Package: Sushi) : Sushi_ChIPExo_CTCF.bedgraph

This data set describes read depths across the genomce resulting from a CTCF ChIP Exo experiment in K562 cells with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIPExo_CTCF.bedgraph
● 0 images

Sushi_ChIPSeq_CTCF.bedgraph (Package: Sushi) : Sushi_ChIPSeq_CTCF.bedgraph

This data set describes read depths across the genomce resulting from a CTCF ChIP seq experiment in K562 cells with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIPSeq_CTCF.bedgraph
● 0 images

Sushi_ChIPSeq_pol2.bed (Package: Sushi) : Sushi_ChIPSeq_pol2.bed

This data set describes aligned sequencing reads for Pol2 in K562 cells as determined by ChIP-seq with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIPSeq_pol2.bed
● 0 images

Sushi_ChIPSeq_pol2.bedgraph (Package: Sushi) : Sushi_ChIPSeq_pol2.bedgraph

This data set describes read depths across the genomce resulting from a Pol2 ChIP seq experiment in K562 cells with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIPSeq_pol2.bedgraph
● 0 images

Sushi_ChIPSeq_severalfactors.bed (Package: Sushi) : Sushi_ChIPSeq_severalfactors.bed

This data set describes binding sites for multiple factors in K562 cells as determined by ChIP-seq with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_ChIPSeq_severalfactors.bed
● 0 images

Sushi_DNaseI.bedgraph (Package: Sushi) : Sushi_DNaseI.bedgraph

This data set describes read depths across the genomce resulting from a DNaseI hypersensitivity experiment in K562 cells with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_DNaseI.bedgraph
● 0 images

Sushi_GWAS.bed (Package: Sushi) : Sushi_GWAS.bed

Bed data representing results from a GWAS study of blood pressure and cardiovascular disease risk with coordinates based on the NCBI36 / hg18 genome build.
● Data Source: BioConductor
● Keywords:
● Alias: Sushi_GWAS.bed
● 0 images