R Graphical Manual

Last data update: 2014.03.03

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CranContrib
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Results 1 - 10 of 41 found.
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Grob-class (Package: ggbio) : Grob getter

'Grob' class is a container for 'grob' based object defined with grid system. Generic function Grob gets grob object supported by grid system, and make an instance of subclass of class 'Grob'.

● Data Source: BioConductor
● Keywords:
● Alias: Grob, Grob,GGbio-method, Grob,gg-method, Grob,gtable-method, Grob,lattice-method, Grob,trellis-method, Grob-class, Grob-method, GrobList, GrobList-class, ggplotGrob-class, latticeGrob-class
● 0 images

Plot (Package: ggbio) : Plot class

genealize a graphic object to a Plot object.

● Data Source: BioConductor
● Keywords:
● Alias: Plot, Plot,GGbio-method, Plot,Ideogram-method, Plot,gg-method, Plot,trellis-method, Plot-class, ggbioPlot-class, ggplotPlot-class, latticePlot-class
● 0 images

Tracked (Package: ggbio) : Tracked class

Create a tracked object, designed for tracks function.

● Data Source: BioConductor
● Keywords:
● Alias: Tracked, Tracked-class
● 0 images

arrangeGrobByParsingLegend (Package: ggbio) : Arrange grobs by parse their legend.

Arrange grobs and parse their legend, then put it together on the right.

● Data Source: BioConductor
● Keywords:
● Alias: arrangeGrobByParsingLegend
● 4 images

autoplot (Package: ggbio) : Generic autoplot function

autoplot is a generic function to visualize various data object, it tries to give better default graphics and customized choices for each data type, quick and convenient to explore your genomic data compare to low level ggplot method, it is much simpler and easy to produce fairly complicate graphics, though you may lose some flexibility for each layer.

● Data Source: BioConductor
● Keywords:
● Alias: +,Bioplot,Any-method, autoplot, autoplot,BSgenome-method, autoplot,BamFile-method, autoplot,BamFileList-method, autoplot,ExpressionSet-method, autoplot,GAlignments-method, autoplot,GRanges-method, autoplot,GRangesList-method, autoplot,IRanges-method, autoplot,OrganismDb-method, autoplot,RangedSummarizedExperiment-method, autoplot,Rle-method, autoplot,RleList-method, autoplot,Seqinfo-method, autoplot,TabixFile-method, autoplot,TxDbOREnsDb-method, autoplot,VCF-method, autoplot,VRanges-method, autoplot,Views-method, autoplot,character-method, autoplot,matrix-method
● 62 images

geom_alignment (Package: ggbio) : Alignment geoms for GRanges object

Show interval data as alignment.

● Data Source: BioConductor
● Keywords:
● Alias: geom_alignment, geom_alignment,BamFile-method, geom_alignment,GRanges-method, geom_alignment,GRangesList-method, geom_alignment,OrganismDb-method, geom_alignment,TxDbOREnsDb-method, geom_alignment,missing-method, geom_alignment,uneval-method
● 12 images

geom_arch (Package: ggbio) : Arch geoms for GRanges object

Show interval data as arches.

● Data Source: BioConductor
● Keywords:
● Alias: geom_arch, geom_arch,GRanges-method, geom_arch,data.frame-method, geom_arch,missing-method, geom_arch,uneval-method
● 3 images

geom_arrow (Package: ggbio) : Arrow geoms for GRanges object

Show interval data as arrows.

● Data Source: BioConductor
● Keywords:
● Alias: geom_arrow, geom_arrow,GRanges-method, geom_arrow,missing-method, geom_arrow,uneval-method
● 7 images

geom_arrowrect (Package: ggbio) : Arrowrect geoms for GRanges object

Show interval data as rectangle with a arrow head.

● Data Source: BioConductor
● Keywords:
● Alias: geom_arrowrect, geom_arrowrect,GRanges-method, geom_arrowrect,missing-method, geom_arrowrect,uneval-method
● 6 images

geom_bar (Package: ggbio) : Segment geoms for GRanges object

Show interval data as vertical bar, width equals to interval width and use 'score' or specified 'y' as y scale.

● Data Source: BioConductor
● Keywords:
● Alias: geom_bar, geom_bar,ANY-method, geom_bar,GRanges-method, geom_bar,chevron-method, geom_bar,missing-method
● 4 images