InferXseqPosterior
(Package: xseq) :
Learn xseq parameters given an initialized model
Learn xseq parameters given an initialized model
● Data Source:
CranContrib
● Keywords:
● Alias: InferXseqPosterior
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Filter network
● Data Source:
CranContrib
● Keywords:
● Alias: FilterNetwork
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ImputeKnn
(Package: xseq) :
Impute missing values (NAs) using K-nearest neighbour averaging
Impute missing values (NAs) using K-nearest neighbour averaging
● Data Source:
CranContrib
● Keywords:
● Alias: ImputeKnn
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GetExpressionDistribution
(Package: xseq) :
Get the conditional distributions for a set of genes
Get the conditional distributions for a set of genes
● Data Source:
CranContrib
● Keywords:
● Alias: GetExpressionDistribution
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NormExpr
(Package: xseq) :
Remove the cis-effects of copy number alterations on gene expression
Remove the cis-effects of copy number alterations on gene expression
● Data Source:
CranContrib
● Keywords:
● Alias: NormExpr
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PlotRegulationHeatmap
(Package: xseq) :
Heatmap showing the connected genes' dysregulation probabilities
Heatmap showing the connected genes' dysregulation probabilities
● Data Source:
CranContrib
● Keywords:
● Alias: PlotRegulationHeatmap
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LearnXseqParameter
(Package: xseq) :
Learn xseq parameters given an initialized model
Learn xseq parameters given an initialized model
● Data Source:
CranContrib
● Keywords:
● Alias: LearnXseqParameter
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InitXseqModel
(Package: xseq) :
The datastructure to store the xseq models
The datastructure to store the xseq models
● Data Source:
CranContrib
● Keywords:
● Alias: InitXseqModel
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QuantileNorm
(Package: xseq) :
Quantile normalize a matrix
Quantile normalize a matrix
● Data Source:
CranContrib
● Keywords:
● Alias: QuantileNorm
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ConvertXseqOutput
(Package: xseq) :
Convert xseq output to a data.frame
Convert xseq output to a data.frame
● Data Source:
CranContrib
● Keywords:
● Alias: ConvertXseqOutput
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