CGHcall

Package: CGHcall
Type: Package
Title: Calling aberrations for array CGH tumor profiles.
Version: 2.34.0
Date: 2014-02-25
Author: Mark van de Wiel, Sjoerd Vosse
Maintainer: Mark van de Wiel <mark.vdwiel@vumc.nl>
Depends: R (>= 2.0.0), impute (>= 1.8.0), DNAcopy (>= 1.6.0), methods,
Biobase, CGHbase (>= 1.15.1), snowfall
Description: Calls aberrations for array CGH data using a six state mixture model as well as several biological concepts that are ignored by existing algorithms. Visualization of profiles is also provided.
License: GPL (http://www.gnu.org/copyleft/gpl.html)
biocViews: Microarray,Preprocessing,Visualization
NeedsCompilation: no
Packaged: 2016-05-04 03:02:20 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'CGHcall' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'CGHcall'
    finding HTML links ... done
    CGHcall-package                         html  
    CGHcall                                 html  
    finding level-2 HTML links ... done

    ExpandCGHcall                           html  
    Wilting                                 html  
    normalize                               html  
    postsegnormalize                        html  
    preprocess                              html  
    segmentData                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (CGHcall)
Making 'packages.html' ... done