GEOquery

Package: GEOquery
Type: Package
Title: Get data from NCBI Gene Expression Omnibus (GEO)
Version: 2.38.4
Date: 2016-05-10
Author: Sean Davis <sdavis2@mail.nih.gov>
Maintainer: Sean Davis <sdavis2@mail.nih.gov>
BugReports: https://github.com/seandavi/GEOquery/issues/new
Depends: methods, Biobase
Imports: XML, RCurl, httr
Suggests: limma, knitr, rmarkdown, RUnit, BiocGenerics
VignetteBuilder: knitr
URL: https://github.com/seandavi/GEOquery
biocViews: Microarray, DataImport, OneChannel, TwoChannel, SAGE
Description: The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray data. Given the rich and varied nature of this resource, it is only natural to want to apply BioConductor tools to these data. GEOquery is the bridge between GEO and BioConductor.
License: GPL-2
NeedsCompilation: no
Packaged: 2016-05-16 01:37:38 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'GEOquery' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'GEOquery'
    finding HTML links ... done
    GDS-class                               html  
    GDS2MA                                  html  
    GEOData-class                           html  
    GEODataTable-class                      html  
    GPL-class                               html  
    GSE-class                               html  
    GSM-class                               html  
    dataTable                               html  
    getGEO                                  html  
    getGEOSuppFiles                         html  
    getGEOfile                              html  
    getGSEDataTables                        html  
    gunzip                                  html  
    parseGEO                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GEOquery)
Making 'packages.html' ... done