InSilicoVA

Package: InSilicoVA
Type: Package
Title: Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
Version: 1.1.2
Date: 2016-03-29
Author: Zehang Li, Tyler McCormick, Sam Clark
Maintainer: Zehang Li <lizehang@uw.edu>
Depends: R (>= 2.15.0), rJava, coda, ggplot2
Description: Computes individual causes of death and population cause-specific mortality fractions using the 'InSilicoVA' algorithm. It uses data derived from verbal autopsy (VA) interviews, in a format similar to the input of the widely used 'InterVA4' method. This package provides general model fitting and customization for 'InSilicoVA' algorithm and basic graphical visualization of the output.
License: GPL-2
NeedsCompilation: no
Packaged: 2016-03-29 15:55:42 UTC; zehangli
Repository: CRAN
Date/Publication: 2016-03-29 18:59:29

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'InSilicoVA' ...
** package 'InSilicoVA' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'InSilicoVA'
    finding HTML links ... done
    InsilicoVA-package                      html  
    RandomPhysician                         html  
    RandomVA1                               html  
    RandomVA2                               html  
    SampleCategory                          html  
    SamplePhysician                         html  
    causetext                               html  
    condprob                                html  
    condprobnum                             html  
    csmf.diag                               html  
    finding level-2 HTML links ... done

    extract.prob                            html  
    get.indiv                               html  
    indivplot                               html  
    insilico                                html  
    insilico.fit                            html  
    insilico.train                          html  
    physician_debias                        html  
    plot.insilico                           html  
    probbase                                html  
    stackplot                               html  
    summary.insilico                        html  
    updateIndiv                             html  
** building package indices
** testing if installed package can be loaded
* DONE (InSilicoVA)
Making 'packages.html' ... done