imageHTS

Package: imageHTS
Version: 1.22.0
Title: Analysis of high-throughput microscopy-based screens
Author: Gregoire Pau, Xian Zhang, Michael Boutros, Wolfgang Huber
Maintainer: Joseph Barry <joseph.barry@embl.de>
Depends: R (>= 2.9.0), EBImage (>= 4.3.12), cellHTS2 (>= 2.10.0)
Imports: tools, Biobase, hwriter, methods, vsn, stats, utils, e1071
Description: imageHTS is an R package dedicated to the analysis of
high-throughput microscopy-based screens. The package provides
a modular and extensible framework to segment cells, extract
quantitative cell features, predict cell types and browse
screen data through web interfaces. Designed to operate in
distributed environments, imageHTS provides a standardized
access to remote data and facilitates the dissemination of
high-throughput microscopy-based datasets.
License: LGPL-2.1
Suggests: BiocStyle, MASS
biocViews: Software, CellBasedAssays, Preprocessing, Visualization
NeedsCompilation: no
Packaged: 2016-05-04 03:42:57 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'imageHTS' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'imageHTS'
    finding HTML links ... done
    collectCellFeatures                     html  
    countObjects                            html  
    extractFeatures                         html  
    fileHTS                                 html  
    getImageConf                            html  
    getUnames                               html  
    getWellFeatures                         html  
    finding level-2 HTML links ... done

    highlightSegmentation                   html  
    imageHTS                                html  
    installCellPicker                       html  
    makeCellHTS                             html  
    parseDCF                                html  
    parseImageConf                          html  
    popCellPicker                           html  
    prw2uname                               html  
    readLearnTS                             html  
    segmentATH                              html  
    segmentWells                            html  
    segmentYeastBF                          html  
    summarizeWells                          html  
    zprime                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (imageHTS)
Making 'packages.html' ... done