ouch

Package: ouch
Type: Package
Title: Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Version: 2.9-2
Date: 2015-07-09
Author: Aaron A. King <kingaa@umich.edu> and Marguerite A. Butler <mbutler@hawaii.edu>
Maintainer: Aaron A. King <kingaa@umich.edu>
Description: Fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.
Depends: R (>= 3.0.0), methods, stats, graphics, subplex
Suggests: ape, geiger
URL: http://kingaa.github.io/ouch/
License: GPL (>= 2)
LazyLoad: true
Collate: ouchtree.R ape2ouch.R glssoln.R rmvnorm.R brown.R hansen.R
methods.R paint.R plot.R
NeedsCompilation: yes
Packaged: 2015-07-10 11:01:43 UTC; kingaa
Repository: CRAN
Date/Publication: 2015-07-10 20:33:01

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ouch' ...
** package 'ouch' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c covar-matrix.c -o covar-matrix.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c weight-matrix.c -o weight-matrix.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o ouch.so covar-matrix.o weight-matrix.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/ouch/libs
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'simulate' from package 'stats' in package 'ouch'
Creating a generic function for 'update' from package 'stats' in package 'ouch'
Creating a generic function for 'coef' from package 'stats' in package 'ouch'
Creating a generic function for 'logLik' from package 'stats' in package 'ouch'
Creating a generic function for 'summary' from package 'base' in package 'ouch'
Creating a generic function for 'print' from package 'base' in package 'ouch'
Creating a generic function for 'plot' from package 'graphics' in package 'ouch'
** help
*** installing help indices
  converting help for package 'ouch'
    finding HTML links ... done
    anolis.ssd                              html  
    ape2ouch                                html  
    bimac                                   html  
    brown                                   html  
    browntree-class                         html  
    hansen                                  html  
    hansentree-class                        html  
    hansentree-methods                      html  
    ouch-package                            html  
    ouchtree-class                          html  
    paint                                   html  
** building package indices
** testing if installed package can be loaded
* DONE (ouch)
Making 'packages.html' ... done