Last data update: 2014.03.03

treebase

Package: treebase
Type: Package
Title: Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
Version: 0.1.2
Authors@R: c(person("Carl", "Boettiger", role = c("aut", "cre"),
email = "cboettig@gmail.com"),
person("Duncan", "Temple Lang", role = "aut"))
Description: Interface to the API for 'TreeBASE' (http://treebase.org)
from 'R.' 'TreeBASE' is a repository of user-submitted phylogenetic
trees (of species, population, or genes) and the data used to create
them.
License: CC0
URL: https://github.com/ropensci/treebase
BugReports: http://www.github.com/ropensci/treebase/issues
Depends: R (>= 2.15), ape
Imports: XML, RCurl, methods, utils
Suggests: testthat
NeedsCompilation: no
Packaged: 2015-10-14 16:19:33 UTC; cboettig
Author: Carl Boettiger [aut, cre],
Duncan Temple Lang [aut]
Maintainer: Carl Boettiger <cboettig@gmail.com>
Repository: CRAN
Date/Publication: 2015-10-14 19:25:36

● Cran Task View: Phylogenetics, WebTechnologies
● 0 images, 17 functions, 0 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'treebase' ...
** package 'treebase' successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'treebase'
    finding HTML links ... done
    cache_treebase                          html  
    clean_data                              html  
    download_metadata                       html  
    drop_nonascii                           html  
    drop_nontrees                           html  
    dryad_metadata                          html  
    get_nex                                 html  
    get_study                               html  
    get_study_id                            html  
    have_branchlength                       html  
    metadata                                html  
    metadata_from_oai                       html  
    oai_metadata                            html  
    phylo_metadata                          html  
    search_treebase                         html  
    show_metadata                           html  
    treebase                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (treebase)
Making 'packages.html' ... done