Package: CINOEDV
Type: Package
Title: Co-Information based N-Order Epistasis Detector and Visualizer
Version: 2.0
Date: 2014-11-26
Author: Junliang Shang
Maintainer: Junliang Shang <shangjunliang110@163.com>
Description: Detecting and visualizing nonlinear interaction effects of single nucleotide polymorphisms or epistatic interactions, especially high-order epistatic interactions, are important topics in bioinformatics because of their significant mathematical and computational challenges. We present CINOEDV (Co-Information based N-Order Epistasis Detector and Visualizer) for detecting, visualizing, and analyzing high-order epistatic interactions by introducing virtual vertices into the construction of a hypergraph. CINOEDV was developed as an alternative to existing software to build a global picture of epistatic interactions and unexpected high-order epistatic interactions, which might provide useful clues for understanding the underlying genetic architecture of complex diseases.
License: GPL-2
LazyLoad: yes
Depends: R.matlab, igraph, ggplot2, reshape2
Packaged: 2014-11-27 07:22:48 UTC; root
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-11-27 09:45:12
Package: AnalyzeFMRI
Version: 1.1-16
Date: 2013-03-19
Title: Functions for analysis of fMRI datasets stored in the ANALYZE or
NIFTI format.
Author: P Lafaye de Micheaux <lafaye@dms.umontreal.ca>, J L Marchini
<marchini@stats.ox.ac.uk>
Maintainer: P Lafaye de Micheaux <lafaye@dms.umontreal.ca>
Depends: tcltk, R.matlab, fastICA
Description: Functions for I/O, visualisation and analysis of
functional Magnetic Resonance Imaging (fMRI) datasets stored in
the ANALYZE or NIFTI format.
License: GPL (>= 2)
Packaged: 2013-03-19 12:41:20 UTC; lafaye
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2013-03-19 15:38:10
providing 
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