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Last data update: 2014.03.03

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webbioc : Bioconductor Web Interface

Package: webbioc
Version: 1.44.0
Date: 2009-02-05
Title: Bioconductor Web Interface
Author: Colin A. Smith <colin@colinsmith.org>
Maintainer: Colin A. Smith <colin@colinsmith.org>
Depends: R (>= 1.8.0), Biobase, affy, multtest, annaffy, vsn, gcrma,
qvalue
Imports: multtest, qvalue, stats, utils, BiocInstaller
SystemRequirements: Unix, Perl (>= 5.6.0), Netpbm
Description: An integrated web interface for doing microarray analysis
using several of the Bioconductor packages. It is intended to
be deployed as a centralized bioinformatics resource for use
by many users. (Currently only Affymetrix oligonucleotide
analysis is supported.)
License: GPL (>= 2)
URL: http://www.bioconductor.org/
LazyLoad: yes
biocViews: Infrastructure, Microarray, OneChannel,
DifferentialExpression
NeedsCompilation: no
Packaged: 2016-05-04 02:39:29 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: DifferentialExpression, Infrastructure, Microarray, OneChannel
● 0 images, 2 functions, 0 datasets
● Reverse Depends: 0

PGSEA : Parametric Gene Set Enrichment Analysis

Package: PGSEA
Type: Package
Title: Parametric Gene Set Enrichment Analysis
Version: 1.46.0
Date: 2012-03-22
Author: Kyle Furge <kyle.furge@vai.org> and Karl Dykema <karl.dykema@vai.org>
Maintainer: Karl Dykema <karl.dykema@vai.org>
Description: Parametric Analysis of Gene Set Enrichment
Depends: R (>= 2.10), GO.db, KEGG.db, AnnotationDbi, annaffy, methods,
Biobase (>= 2.5.5)
Suggests: GSEABase, GEOquery, org.Hs.eg.db, hgu95av2.db, limma
License: GPL-2
ZipData: no
biocViews: Microarray
LazyData: no
NeedsCompilation: no
Packaged: 2016-05-04 03:06:30 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Microarray
● 1 images, 11 functions, 5 datasets
● Reverse Depends: 1

a4Base : Automated Affymetrix Array Analysis Base Package

Package: a4Base
Type: Package
Title: Automated Affymetrix Array Analysis Base Package
Version: 1.20.0
Date: 2013-10-02
Author: Willem Talloen, Tobias Verbeke, Tine Casneuf, An De Bondt,
Steven Osselaer and Hinrich Goehlmann, Willem Ligtenberg
Maintainer: Tobias Verbeke <tobias.verbeke@openanalytics.eu>, Willem
Ligtenberg <willem.ligtenberg@openanalytics.eu>
Description: Automated Affymetrix Array Analysis
Depends: methods, graphics, grid, Biobase, AnnotationDbi, annaffy, mpm,
genefilter, limma, multtest, glmnet, a4Preproc, a4Core, gplots
Suggests: Cairo, ALL
Enhances: gridSVG, JavaGD
License: GPL-3
biocViews: Microarray
NeedsCompilation: no
Packaged: 2016-05-04 04:01:47 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Microarray
● 19 images, 33 functions, 1 datasets
● Reverse Depends: 1

a4Reporting : Automated Affymetrix Array Analysis Reporting Package

Package: a4Reporting
Type: Package
Title: Automated Affymetrix Array Analysis Reporting Package
Version: 1.20.0
Date: 2010-06-08
Author: Tobias Verbeke
Maintainer: Tobias Verbeke <tobias.verbeke@openanalytics.eu>, Willem Ligtenberg <willem.ligtenberg@openanalytics.eu>
Description: Automated Affymetrix Array Analysis Reporting Package
Depends: methods, annaffy
Imports: xtable, utils
biocViews: Microarray
License: GPL-3
NeedsCompilation: no
Packaged: 2016-05-04 04:01:54 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Microarray
● 0 images, 6 functions, 0 datasets
● Reverse Depends: 1