Last data update: 2014.03.03

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Results 1 - 6 of 6 found.
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GHap : Genome-Wide Haplotyping

Package: GHap
Type: Package
Title: Genome-Wide Haplotyping
Version: 1.2.1
Date: 2016-05-13
Author: Yuri Tani Utsunomiya, Marco Milanesi
Maintainer: Yuri Tani Utsunomiya <ytutsunomiya@gmail.com>
Description: Haplotype calling from phased SNP data.
License: GPL (>= 2)
Depends: bigmemory (>= 4.4.6), parallel (>= 3.0.0)
Suggests: R.rsp
VignetteBuilder: R.rsp
NeedsCompilation: no
Packaged: 2016-06-10 21:09:39 UTC; yuri
Repository: CRAN
Date/Publication: 2016-06-10 23:28:42

● Data Source: CranContrib
● 0 images, 26 functions, 0 datasets
● Reverse Depends: 0

bigalgebra : BLAS routines for native R matrices and big.matrix objects.

Package: bigalgebra
Version: 0.8.4
Date: 2014-04-15
Title: BLAS routines for native R matrices and big.matrix objects.
Author: Michael J. Kane, Bryan Lewis, and John W. Emerson
Maintainer: Michael J. Kane <bigmemoryauthors@gmail.com>
Imports: methods
Depends: bigmemory (>= 4.0.0)
LinkingTo: bigmemory, BH
Description: This package provides arithmetic functions for R matrix and big.matrix objects.
License: LGPL-3 | Apache License 2.0
Copyright: (C) 2014 Michael J. Kane, Bryan Lewis, and John W. Emerson
URL: http://www.bigmemory.org
LazyLoad: yes
Packaged: 2012-12-26 22:17:06 UTC; blewis
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2014-04-16 09:21:50

● Data Source: CranContrib
● 0 images, 3 functions, 0 datasets
● Reverse Depends: 0

biganalytics : Utilities for 'big.matrix' Objects from Package 'bigmemory'

Package: biganalytics
Version: 1.1.14
Date: 2016-02-17
Title: Utilities for 'big.matrix' Objects from Package 'bigmemory'
Author: John W. Emerson <jayemerson@gmail.com> and Michael J. Kane
<kaneplusplus@gmail.com>
Maintainer: Michael J. Kane <bigmemoryauthors@gmail.com>
Contact: Jay and Mike <bigmemoryauthors@gmail.com>
Depends: methods, stats, utils, bigmemory (>= 4.0.0), foreach, biglm
LinkingTo: Rcpp, bigmemory, BH
Description: Extend the 'bigmemory' package with various analytics.
Functions 'bigkmeans' and 'binit' may also be used with native R objects.
For 'tapply'-like functions, the bigtabulate package may also be helpful.
For linear algebra support, see 'bigalgebra'. For mutex (locking) support
for advanced shared-memory usage, see 'synchronicity'.
License: LGPL-3 | Apache License 2.0
Copyright: (C) 2013 John W. Emerson and Michael J. Kane
URL: http://www.bigmemory.org
LazyLoad: yes
Biarch: yes
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-02-17 22:46:28 UTC; vagrant
Repository: CRAN
Date/Publication: 2016-02-18 06:51:28

● Data Source: CranContrib
● 0 images, 6 functions, 0 datasets
Reverse Depends: 2

biglasso : Big Lasso: Extending Lasso Model Fitting to Big Data in R

Package: biglasso
Version: 1.0-1
Date: 2016-02-27
Title: Big Lasso: Extending Lasso Model Fitting to Big Data in R
Author: Yaohui Zeng [aut,cre], Patrick Breheny [ctb]
Maintainer: Yaohui Zeng <yaohui-zeng@uiowa.edu>
Description: Extend lasso and elastic-net model fitting for ultrahigh-dimensional, multi-gigabyte data sets that cannot be loaded into memory. Compared to existing lasso-fitting packages, it preserves equivalently fast computation speed but is much more memory-efficient, thus allowing for very powerful big data analysis even with only a single laptop.
License: GPL-2
Depends: bigmemory, Matrix, parallel, ncvreg
Imports: Rcpp (>= 0.12.1), methods
LinkingTo: Rcpp, RcppArmadillo, bigmemory, BH
NeedsCompilation: yes
Packaged: 2016-03-02 05:20:15 UTC; yazeng
Repository: CRAN
Date/Publication: 2016-03-02 11:10:15

● Data Source: CranContrib
● 0 images, 10 functions, 0 datasets
● Reverse Depends: 0

bigpca : PCA, Transpose and Multicore Functionality for 'big.matrix' Objects

Package: bigpca
Type: Package
Title: PCA, Transpose and Multicore Functionality for 'big.matrix'
Objects
Version: 1.0.3
Date: 2015-11-07
Author: Nicholas Cooper
Maintainer: Nicholas Cooper <nick.cooper@cimr.cam.ac.uk>
Depends: R (>= 3.0), grDevices, graphics, stats, utils, reader (>=
1.0.1), NCmisc (>= 1.1), bigmemory (>= 4.0.0), biganalytics
Imports: parallel, methods, bigmemory.sri, irlba
OS_type: unix
Description: Adds wrappers to add functionality for big.matrix objects (see the bigmemory project).
This allows fast scalable principle components analysis (PCA), or singular value decomposition (SVD).
There are also functions for transposing, using multicore 'apply' functionality, data importing
and for compact display of big.matrix objects. Most functions also work for standard matrices if
RAM is sufficient.
License: GPL (>= 2)
Collate: 'bigpca.R'
NeedsCompilation: no
Packaged: 2015-11-07 18:49:10 UTC; ncooper
Repository: CRAN
Date/Publication: 2015-11-08 08:40:28

● Data Source: CranContrib
● 0 images, 22 functions, 0 datasets
● Reverse Depends: 0

bigtabulate : Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects

Package: bigtabulate
Version: 1.1.5
Date: 2016-02-17
Title: Table, Apply, and Split Functionality for Matrix and
'big.matrix' Objects
Author: Michael J. Kane <kaneplusplus@gmail.com> and John W. Emerson
<jayemerson@gmail.com>
Maintainer: Michael J. Kane <bigmemoryauthors@gmail.com>
Contact: Jay and Mike <bigmemoryauthors@gmail.com>
Depends: methods, bigmemory (>= 4.0.0), biganalytics
LinkingTo: Rcpp, BH, bigmemory
Description: Extend the bigmemory package with 'table', 'tapply', and 'split'
support for 'big.matrix' objects. The functions may also be used with native R
matrices for improving speed and memory-efficiency.
License: LGPL-3 | Apache License 2.0
Copyright: (C) 2015 Michael J. Kane and John W. Emerson
URL: http://www.bigmemory.org
LazyLoad: yes
Biarch: yes
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-02-17 21:07:30 UTC; vagrant
Repository: CRAN
Date/Publication: 2016-02-18 06:55:19

● Data Source: CranContrib
● 0 images, 2 functions, 0 datasets
● Reverse Depends: 0