R Graphical Manual

Last data update: 2014.03.03

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CranContrib
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Results 1 - 2 of 2 found.
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RpsiXML : R interface to PSI-MI 2.5 files

Package: RpsiXML
Version: 2.14.0
Date: 2015-04-09
Title: R interface to PSI-MI 2.5 files
Author: Jitao David Zhang, Stefan Wiemann, Marc Carlson, with contributions from Tony Chiang
Maintainer: Jitao David Zhang <jitao_david.zhang@roche.com>
Depends: methods, annotate (>= 1.21.0), graph (>= 1.21.0), Biobase,
RBGL (>= 1.17.0), XML (>= 2.4.0), hypergraph (>= 1.15.2),
AnnotationDbi
Suggests: org.Hs.eg.db, org.Mm.eg.db, org.Dm.eg.db, org.Rn.eg.db,
org.Sc.sgd.db, hom.Hs.inp.db, hom.Mm.inp.db, hom.Dm.inp.db,
hom.Rn.inp.db, hom.Sc.inp.db, Rgraphviz, ppiStats, ScISI
Description: Queries, data structure and interface to visualization of interaction datasets. This package inplements the PSI-MI 2.5 standard and supports up to now 8 databases. Further databases supporting PSI-MI 2.5 standard will be added continuously.
Collate: AllClasses.R AllGenerics.R AllMethods.R SAXhandlers.R
funcsAnnotation.R hyperGraphs.R psi25parser.R psimi25Source.R
validatePSIMI25.R graphSpeciesConverter.R
License: LGPL-3
URL: http://www.bioconductor.org
biocViews: Infrastructure, Proteomics
NeedsCompilation: no
Packaged: 2016-05-04 03:09:44 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: Infrastructure, Proteomics
● 0 images, 39 functions, 0 datasets
● Reverse Depends: 1

altcdfenvs : alternative CDF environments (aka probeset mappings)

Package: altcdfenvs
Version: 2.34.0
Title: alternative CDF environments (aka probeset mappings)
Author: Laurent Gautier <lgautier@gmail.com>
Maintainer: Laurent Gautier <lgautier@gmail.com>
biocViews: Microarray, OneChannel, QualityControl, Preprocessing,
Annotation, ProprietaryPlatforms, Transcription
Depends: R (>= 2.7), methods, BiocGenerics (>= 0.1.0), S4Vectors (>=
0.9.25), Biobase (>= 2.15.1), affy, makecdfenv, Biostrings,
hypergraph
Suggests: plasmodiumanophelescdf, hgu95acdf, hgu133aprobe, hgu133a.db,
hgu133acdf, Rgraphviz, RColorBrewer
Description: Convenience data structures and functions to handle
cdfenvs
License: GPL (>= 2)
Collate: appendCdfEnvAffy.R buildCdfEnv.matchprobes.R
buildCdfEnv.biostrings.R CdfEnv.R cdfenvs.R copyCdfEnvAffy.R
readFASTA.R removeIndex.R unique.CdfEnvAffy.R
LazyLoad: yes
Packaged: 2016-05-04 02:41:48 UTC; biocbuild
NeedsCompilation: no

● Data Source: BioConductor
● BiocViews: Annotation, Microarray, OneChannel, Preprocessing, ProprietaryPlatforms, QualityControl, Transcription
● 1 images, 18 functions, 1 datasets
● Reverse Depends: 0