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Package: AnnotationHubData
Type: Package
Title: Transform public data resources into Bioconductor Data
Structures
Version: 1.2.2
Authors@R:
c(person("Martin", "Morgan", role="ctb"),
person("Marc", "Carlson", role="ctb"),
person("Dan", "Tenenbaum", role="ctb"),
person("Sonali", "Arora", role="ctb"),
person("Paul", "Shannon", role="ctb"),
person("Bioconductor Package Maintainer",
email="maintainer@bioconductor.org", role="cre"))
Depends: R (>= 3.2.2), methods, S4Vectors (>= 0.7.21), IRanges (>=
2.3.23), GenomicRanges, AnnotationHub
Suggests: RUnit, knitr, RMySQL, BiocStyle, grasp2db
Imports: GenomicFeatures, Rsamtools, rtracklayer, BiocGenerics,
jsonlite, BiocInstaller, httr, AnnotationDbi, Biobase,
Biostrings, DBI, GEOquery, GenomeInfoDb, OrganismDbi, RSQLite,
rBiopaxParser, AnnotationForge, futile.logger (>= 1.3.0), XML,
xml2, curl
Description: These recipes convert a wide variety and a growing number of
public bioinformatic data sets into easily-used standard Bioconductor data
structures.
License: Artistic-2.0
LazyLoad: yes
biocViews: DataImport
VignetteBuilder: knitr
Collate: Message-class.R ImportPreparer-class.R
makeAnnotationHubResource.R HubMetadata-class.R
AnnotationHubMetadata-class.R utils.R updateResources.R
ahmToJson.R webAccessFunctions.R makeBioPaxImporter.R
makeChEA.R makedbSNPVCF.R makeEncodeDCC.R
makeEnsemblGtfToGRanges.R makeEnsemblFasta.R
makeEpigenomeRoadmap.R makeGencodeFasta.R makeGenecodeGFF.R
makeGrasp2Db.R makeGSE62944ToExpressionSet.R makeHaemCode.R
makeInparanoid8ToDbs.R makeNCBIToOrgDbs.R
makeRecentOrgPkgsToDbs.R makePazar.R makeRefNet.R
makeUCSCChain.R makeUCSC2Bit.R makeUCSCTracks.R
trackWithAuxiliaryTableToGRangesRecipe.R
UCSCTrackUpdateChecker.R makeEnsemblTwoBit.R
NeedsCompilation: no
Packaged: 2016-05-16 05:39:14 UTC; biocbuild
Author: Martin Morgan [ctb],
Marc Carlson [ctb],
Dan Tenenbaum [ctb],
Sonali Arora [ctb],
Paul Shannon [ctb],
Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>
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providing 
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