marked : Mark-Recapture Analysis for Survival and Abundance Estimation

Package: marked
Version: 1.1.11
Date: 2016-3-7
Title: Mark-Recapture Analysis for Survival and Abundance Estimation
Author: Jeff Laake <jeff.laake@noaa.gov>, Devin Johnson
<devin.johnson@noaa.gov>, Paul Conn <paul.conn@noaa.gov>
Maintainer: Jeff Laake <Jeff.Laake@noaa.gov>
Description: Functions for fitting various models to capture-recapture data
including fixed and mixed-effects Cormack-Jolly-Seber(CJS) for survival
estimation and POPAN structured Jolly-Seber models for abundance
estimation. Includes a CJS models that concurrently estimates and corrects
for tag loss. Hidden Markov model (HMM) implementations of CJS and
multistate models with and without state uncertainty.
Depends: R (>= 2.15.0), lme4, methods, parallel
Imports: graphics, stats, utils, R2admb, truncnorm, coda, Matrix,
numDeriv, expm, Rcpp (>= 0.9.13), optimx (>= 2013.8.6)
Suggests: ggplot2
LinkingTo: Rcpp
SystemRequirements: ADMB version 11 (http://admb-project.org/) for
use.admb=TRUE; see readme.txt
LazyLoad: yes
License: GPL (>= 2)
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-03-07 18:50:53 UTC; JLaake
Repository: CRAN
Date/Publication: 2016-03-07 22:31:49