Package: rnaSeqMap
Type: Package
Title: rnaSeq secondary analyses
Version: 2.30.0
Date: 2014-09-30
Author: Anna Lesniewska <alesniewska@cs.put.poznan.pl>; Michal
Okoniewski <michal@fgcz.ethz.ch>
Maintainer: Michal Okoniewski <michal@fgcz.ethz.ch>
Depends: R (>= 2.11.0), methods, Biobase, Rsamtools, GenomicAlignments
Imports: GenomicRanges , IRanges, edgeR, DESeq, DBI
Description: The rnaSeqMap library provides classes and functions to
analyze the RNA-sequencing data using the coverage profiles in
multiple samples at a time
License: GPL-2
Collate: zzz.R utils.R plots.R NucleotideDistr.R SeqReads.R NDplots.R
NDtransforms.R bam2sig.R parseGff3.R pipelines.R
normalizations.R measures.R generators.R camelWrapper.R
biocViews: Annotation, ReportWriting, Transcription, GeneExpression,
DifferentialExpression, Sequencing, RNASeq, SAGE, Visualization
NeedsCompilation: yes
Packaged: 2016-05-04 03:45:55 UTC; biocbuild
● Data Source:
BioConductor
● BiocViews: Annotation, DifferentialExpression, GeneExpression, RNASeq, ReportWriting, SAGE, Sequencing, Transcription, Visualization
●
0 images,
37 functions,
1 datasets
●
Reverse Depends: 1
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