The exdat data set is list of three objects. exdat$Y is a vector of length 1000, 500 0s and 500 1s. exdat$X is a matrix of 1000 by 10. This simulated X matrix is assumed to be rare variants. All eliments are 0, 1 or 2. exdat$SNP0indx is a vector of length 10. The values are 1 or 0, 0 indicate corresponding column of X matrix have no association with Y vector.
kegg9
(Package: aSPU) :
A subset of coronary artery disease (CAD) data
Data on coronary artery disease, myocardial infarction have been contributed by CARDIoGRAMplusC4D investigators and have been downloaded from www.CARDIOGRAMPLUSC4D.ORG
SAMD11
(Package: aSPU) :
An example data for MTaSPUsSet test
Genetic Investigation of ANthropometric Traits (GIANT) consortium data contain P-values of 2.7 million SNPs with six anthropometric traits that are well established to represent body size and shape: height, weight, BMI, waist circumference (WC), hip circumference(HIP). The data is downloadable from https://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files
someGs
(Package: aSPU) :
An example data for MTaSPUsSet test
Genetic Investigation of ANthropometric Traits (GIANT) consortium data contain P-values of 2.7 million SNPs with six anthropometric traits that are well established to represent body size and shape: height, weight, BMI, waist circumference (WC), hip circumference(HIP). The data is downloadable from https://www.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files