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Generate fold change and t-test p-value for all rows of a data matrix
● Data Source:
BioConductor
● Keywords: ~kwd1, ~kwd2
● Alias: applyttest
●
0 images
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Generate fold changes and p-values for each protein (col 1) determined by a number of peptides (col 2).
● Data Source:
BioConductor
● Keywords: ~kwd1, ~kwd2
● Alias: applyttestPep
●
2 images
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buildSpectraLibPair
(Package: SwathXtend) :
Build a spectra library by integrating a pair of spectrum libraries
Build a spectra library by integrating a pair of spectrum libraries
● Data Source:
BioConductor
● Keywords:
● Alias: buildSpectraLibPair
●
0 images
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canonicalFormat
(Package: SwathXtend) :
Standardise a sprectrum library data frame
Standardise a sprectrum library data frame
● Data Source:
BioConductor
● Keywords:
● Alias: canonicalFormat
●
0 images
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checkQuality
(Package: SwathXtend) :
Checking for the integration quality of two libraries
Checking for the integration quality of two libraries
● Data Source:
BioConductor
● Keywords:
● Alias: checkQuality
●
0 images
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cleanLib
(Package: SwathXtend) :
Spectrum library cleanining
Spectrum library cleanining
● Data Source:
BioConductor
● Keywords:
● Alias: cleanLib
●
0 images
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Divide appropriately to make all column medians equal to the max median
● Data Source:
BioConductor
● Keywords: ~kwd1, ~kwd2
● Alias: medianNorm
●
1 images
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Calculate normalization factor, histogram peak and width at half peak for a vector
● Data Source:
BioConductor
● Keywords: ~kwd1, ~kwd2
● Alias: mlr
●
0 images
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Do mlr normalization separately for each set of replicates first, then normalize the resulting matrix
● Data Source:
BioConductor
● Keywords:
● Alias: mlrGroup
●
1 images
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Calculate all pairwise ratios, log-transform them, find the least variable replicate.
● Data Source:
BioConductor
● Keywords:
● Alias: mlrrep
●
1 images
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providing 
.